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EGLN1 egl-9 family hypoxia inducible factor 1 [ Equus asinus (ass) ]

Gene ID: 106846732, updated on 13-Mar-2024

Summary

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Gene symbol
EGLN1
Gene description
egl-9 family hypoxia inducible factor 1
See related
Ensembl:ENSEASG00005025099
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus asinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See EGLN1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
5
Annotation release Status Assembly Chr Location
101 current ASM1607732v2 (GCF_016077325.2) 2 NC_052178.1 (122941596..122997004)
100 previous assembly ASM130575v1 (GCF_001305755.1) Unplaced Scaffold NW_014638332.1 (181063..235820)

Chromosome 2 - NC_052178.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123281060 Neighboring gene uncharacterized LOC123281061 Neighboring gene SprT-like N-terminal domain Neighboring gene exocyst complex component 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ferrous iron binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables peptidyl-proline 4-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to hypoxia IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptidyl-proline hydroxylation to 4-hydroxy-L-proline IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: egl nine homolog 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus asinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1607732v2

Genomic

  1. NC_052178.1 Reference ASM1607732v2

    Range
    122941596..122997004
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014865703.2 → XP_014721189.2  LOW QUALITY PROTEIN: egl nine homolog 1

    UniProtKB/TrEMBL
    A0A8C4LXM7
    Related
    ENSEASP00005045411.1, ENSEAST00005062509.1
    Conserved Domains (1) summary
    smart00702
    Location:224 → 395
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
Nucleotide Protein
Heading Accession and Version

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