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LOC106312229 histone-lysine N-methyltransferase family member SUVH9 [ Brassica oleracea (wild cabbage) ]

Gene ID: 106312229, updated on 11-Sep-2024

Summary

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Gene symbol
LOC106312229
Gene description
histone-lysine N-methyltransferase family member SUVH9
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica oleracea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106312229 in Genome Data Viewer
Location:
chromosome: C8
Exon count:
3
Annotation release Status Assembly Chr Location
100 current BOL (GCF_000695525.1) C8 NC_027755.1 (28995985..28998749, complement)

Chromosome C8 - NC_027755.1Genomic Context describing neighboring genes Neighboring gene mitochondrial uncoupling protein 1 Neighboring gene reticulon-like protein B12 Neighboring gene ataxin-3 homolog Neighboring gene protein NRT1/ PTR FAMILY 8.1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_027755.1 Chromosome C8 Reference BOL Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by GO

Function Evidence Code Pubs
enables histone methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone-lysine N-methyltransferase family member SUVH9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica oleracea Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BOL Primary Assembly

Genomic

  1. NC_027755.1 Reference BOL Primary Assembly

    Range
    28995985..28998749 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013749670.1 → XP_013605124.1  histone-lysine N-methyltransferase family member SUVH9

    UniProtKB/TrEMBL
    A0A0D3DSY3, A0A3P6FXR2
    Conserved Domains (3) summary
    smart00466
    Location:179 → 335
    SRA; SET and RING finger associated domain
    smart00317
    Location:477 → 625
    SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
    pfam05033
    Location:366 → 468
    Pre-SET; Pre-SET motif
Nucleotide Protein
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