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Rrs1 ribosome biogenesis regulator 1 homolog [ Chinchilla lanigera (long-tailed chinchilla) ]

Gene ID: 106146256, updated on 13-Mar-2024

Summary

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Gene symbol
Rrs1
Gene description
ribosome biogenesis regulator 1 homolog
Gene type
protein coding
RefSeq status
MODEL
Organism
Chinchilla lanigera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Chinchillidae; Chinchilla
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current ChiLan1.0 (GCF_000276665.1) Unplaced Scaffold NW_004955444.1 (12740172..12751674, complement)

NW_004955444.1Genomic Context describing neighboring genes Neighboring gene MYB proto-oncogene like 1 Neighboring gene vexin Neighboring gene alcohol dehydrogenase iron containing 1 Neighboring gene tripartite motif containing 55 Neighboring gene corticotropin releasing hormone

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004955444.1 Unplaced Scaffold Reference ChiLan1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal large subunit biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal large subunit export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of preribosome, large subunit precursor IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribosome biogenesis regulatory protein homolog
Names
ribosome biogenesis regulator homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chinchilla lanigera Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChiLan1.0 Primary Assembly

Genomic

  1. NW_004955444.1 Reference ChiLan1.0 Primary Assembly

    Range
    12740172..12751674 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013518193.1 → XP_013373647.1  ribosome biogenesis regulatory protein homolog isoform X3

    Conserved Domains (1) summary
    pfam04939
    Location:32 → 193
    RRS1; Ribosome biogenesis regulatory protein (RRS1)

  2. XM_013518191.1 → XP_013373645.1  ribosome biogenesis regulatory protein homolog isoform X1

    Conserved Domains (1) summary
    pfam04939
    Location:32 → 193
    RRS1; Ribosome biogenesis regulatory protein (RRS1)

  3. XM_013518192.1 → XP_013373646.1  ribosome biogenesis regulatory protein homolog isoform X2

    Conserved Domains (1) summary
    pfam04939
    Location:32 → 193
    RRS1; Ribosome biogenesis regulatory protein (RRS1)

RNA

  1. XR_262264.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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