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Gm20716 predicted gene 20716 [ Mus musculus (house mouse) ]

Gene ID: 105980075, updated on 25-Jan-2022

Summary

Official Symbol
Gm20716provided by MGI
Official Full Name
predicted gene 20716provided by MGI
Primary source
MGI:MGI:5313163
See related
AllianceGenome:MGI:5313163
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Dpm1-adnp
Summary
This locus represents naturally occurring readthrough transcription between the neighboring Dpm1 (dolichol-phosphate (beta-D) mannosyltransferase 1) and Adnp (activity-dependent neuroprotective protein) genes on chromosome 2. The readthrough transcript is a candidate for nonsense-mediated mRNA decay (NMD), and is unlikely to produce a protein product. [provided by RefSeq, Jun 2015]
Expression
Ubiquitous expression in CNS E11.5 (RPKM 35.9), CNS E14 (RPKM 35.3) and 28 other tissues See more
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Genomic context

See Gm20716 in Genome Data Viewer
Location:
2 H3; 2 88.41 cM
Exon count:
12
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (168022885..168072299, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (168180965..168230379, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene predicted gene, 33185 Neighboring gene predicted gene, 54130 Neighboring gene activity-dependent neuroprotective protein Neighboring gene dolichol-phosphate (beta-D) mannosyltransferase 1 Neighboring gene molybdenum cofactor synthesis 3 Neighboring gene 28S ribosomal protein S18c, mitochondrial pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_132310.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK141486, BC052455, BX005039

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    168022885..168072299 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)