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wars1 tryptophanyl-tRNA synthetase 1 [ Fundulus heteroclitus (mummichog) ]

Gene ID: 105917211, updated on 16-Mar-2024

Summary

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Gene symbol
wars1
Gene description
tryptophanyl-tRNA synthetase 1
See related
Ensembl:ENSFHEG00000005785
Gene type
protein coding
RefSeq status
MODEL
Organism
Fundulus heteroclitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Fundulidae; Fundulus
Also known as
wars
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 19
Exon count:
12
Annotation release Status Assembly Chr Location
102 current MU-UCD_Fhet_4.1 (GCF_011125445.2) 19 NC_046379.1 (4711564..4720834)
101 previous assembly Fundulus_heteroclitus-3.0.2 (GCF_000826765.1) Unplaced Scaffold NW_012224631.1 (3551..12539, complement)

Chromosome 19 - NC_046379.1Genomic Context describing neighboring genes Neighboring gene brain-enriched guanylate kinase-associated protein Neighboring gene WD repeat domain 25 Neighboring gene tubulin alpha-1B chain-like Neighboring gene mitochondrial basic amino acids transporter

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tryptophan-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tryptophanyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tryptophan--tRNA ligase, cytoplasmic
Names
Tryptophan--tRNA ligase, cytoplasmic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fundulus heteroclitus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MU-UCD_Fhet_4.1 Primary Assembly

Genomic

  1. NC_046379.1 Reference MU-UCD_Fhet_4.1 Primary Assembly

    Range
    4711564..4720834
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021310270.2 → XP_021165945.2  tryptophan--tRNA ligase, cytoplasmic

    UniProtKB/TrEMBL
    A0A3Q2NZA2
    Conserved Domains (2) summary
    PLN02486
    Location:89 → 471
    PLN02486; aminoacyl-tRNA ligase
    cd00936
    Location:17 → 66
    WEPRS_RNA; WEPRS_RNA binding domain. This short RNA-binding domain is found in several higher eukaryote aminoacyl-tRNA synthetases (aaRSs). It is found in multiple copies in eukaryotic bifunctional glutamyl-prolyl-tRNA synthetases (EPRS) in a region that separates ...

  2. XM_012851950.3 → XP_012707404.2  tryptophan--tRNA ligase, cytoplasmic

    UniProtKB/TrEMBL
    A0A3Q2NZA2
    Conserved Domains (2) summary
    PLN02486
    Location:89 → 471
    PLN02486; aminoacyl-tRNA ligase
    cd00936
    Location:17 → 66
    WEPRS_RNA; WEPRS_RNA binding domain. This short RNA-binding domain is found in several higher eukaryote aminoacyl-tRNA synthetases (aaRSs). It is found in multiple copies in eukaryotic bifunctional glutamyl-prolyl-tRNA synthetases (EPRS) in a region that separates ...

  3. XM_036150690.1 → XP_036006583.1  tryptophan--tRNA ligase, cytoplasmic

    UniProtKB/TrEMBL
    A0A3Q2NZA2
    Conserved Domains (2) summary
    PLN02486
    Location:89 → 471
    PLN02486; aminoacyl-tRNA ligase
    cd00936
    Location:17 → 66
    WEPRS_RNA; WEPRS_RNA binding domain. This short RNA-binding domain is found in several higher eukaryote aminoacyl-tRNA synthetases (aaRSs). It is found in multiple copies in eukaryotic bifunctional glutamyl-prolyl-tRNA synthetases (EPRS) in a region that separates ...
Nucleotide Protein
Heading Accession and Version

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