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SPTY2D1 SPT2 chromatin protein domain containing 1 [ Microcebus murinus (gray mouse lemur) ]

Gene ID: 105879951, updated on 13-Mar-2024

Summary

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Gene symbol
SPTY2D1
Gene description
SPT2 chromatin protein domain containing 1
See related
Ensembl:ENSMICG00000017602
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcebus murinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Microcebus
Orthologs
human mouse all
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Genomic context

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See SPTY2D1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Mmur_3.0 (GCF_000165445.2) 5 NC_033664.1 (42422008..42443156)
100 previous assembly Mmur_2.0 (GCF_000165445.1) Unplaced Scaffold NW_012197353.1 (358350..379518)

Chromosome 5 - NC_033664.1Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase non-receptor type 5 Neighboring gene uncharacterized LOC105879962 Neighboring gene transmembrane protein 86A Neighboring gene immunoglobulin superfamily member 22 Neighboring gene uncharacterized LOC105879960 Neighboring gene UEV and lactate/malate dehyrogenase domains Neighboring gene tumor susceptibility 101

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nucleosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein SPT2 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcebus murinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmur_3.0 Primary Assembly

Genomic

  1. NC_033664.1 Reference Mmur_3.0 Primary Assembly

    Range
    42422008..42443156
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012780616.2 → XP_012636070.1  protein SPT2 homolog

    UniProtKB/TrEMBL
    A0A8C5VAT7
    Related
    ENSMICP00000016029.2, ENSMICT00000017602.3
    Conserved Domains (1) summary
    pfam08243
    Location:602 → 665
    SPT2; SPT2 chromatin protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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