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Mmur_2.0

Organism name:
Microcebus murinus (gray mouse lemur)
Isolate:
8
Sex:
female
BioSample:
SAMN03121888
BioProject:
PRJNA19967
Submitter:
Baylor College of Medicine and Broad Institute
Date:
2015/05/01
Synonyms:
micMur2
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_000165445.2 (replaced)
RefSeq assembly accession:
GCF_000165445.1 (replaced)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
ABDC02
Assembly method:
AllPathsLG v. 41070; Atlas Link v. 1.0; Atlas GapFill v. 2.0; PBJelly2 v. 14.9.9
Genome coverage:
221.6x
Sequencing technology:
Illumina; PacBio RS; PacBio RSII

IDs: 329621 [UID] 1747348 [GenBank] 1788088 [RefSeq]

See Genome Information for Microcebus murinus

History (Show revision history)

Comment

The sequenced mouse lemur (Microcebus murinus) was maintained in a colony at Caltech through John Allman, Division of Biology 216-76, Caltech, Pasadena, CA 91125. John Allman obtained all their animals from a colony in France (Parc Zoologique de Paris) ... through the good offices of Dr. Claude-Anne Gauthier (Primate Coordinator; cagauth@cimrs1.mnhn.fr).  more

Global statistics

Total sequence length2,438,804,424
Total assembly gap length61,028,709
Gaps between scaffolds0
Number of scaffolds10,311
Scaffold N503,711,085
Scaffold L50190
Number of contigs56,281
Contig N50182,929
Contig L503,449
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)56,281

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,438,804,42410,3112,377,775,7153,711,08545,9700
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