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ATXN2 ataxin 2 [ Propithecus coquereli (Coquerel's sifaka) ]

Gene ID: 105825624, updated on 13-Mar-2024

Summary

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Gene symbol
ATXN2
Gene description
ataxin 2
See related
Ensembl:ENSPCOG00000022031
Gene type
protein coding
RefSeq status
MODEL
Organism
Propithecus coquereli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus
Orthologs
human mouse all
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Genomic context

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See ATXN2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
26
Annotation release Status Assembly Chr Location
100 current Pcoq_1.0 (GCF_000956105.1) Unplaced Scaffold NW_012154285.1 (6178954..6307349, complement)

NW_012154285.1Genomic Context describing neighboring genes Neighboring gene PH domain containing endocytic trafficking adaptor 1 Neighboring gene SH2B adaptor protein 3 Neighboring gene BRCA1 associated protein Neighboring gene acyl-CoA dehydrogenase family member 10 Neighboring gene aldehyde dehydrogenase 2 family member

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012154285.1 Unplaced Scaffold Reference Pcoq_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in stress granule assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic stress granule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ataxin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Propithecus coquereli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pcoq_1.0 Primary Assembly

Genomic

  1. NW_012154285.1 Reference Pcoq_1.0 Primary Assembly

    Range
    6178954..6307349 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012663466.1 → XP_012518920.1  ataxin-2

    UniProtKB/TrEMBL
    A0A2K6G1R3
    Related
    ENSPCOP00000020175.1, ENSPCOT00000030827.1
    Conserved Domains (3) summary
    pfam06741
    Location:391 → 452
    LsmAD; LsmAD domain
    pfam07145
    Location:891 → 907
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:249 → 318
    SM-ATX; Ataxin 2 SM domain
Nucleotide Protein
Heading Accession and Version

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