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LOC105669853 ras-related protein Rab-40C [ Linepithema humile (Argentine ant) ]

Gene ID: 105669853, updated on 22-Oct-2023

Summary

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Gene symbol
LOC105669853
Gene description
ras-related protein Rab-40C
See related
EnsemblRapid:LOC105669853
Gene type
protein coding
RefSeq status
MODEL
Organism
Linepithema humile
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Dolichoderinae; Linepithema
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Lhum_UMD_V04 (GCF_000217595.1) Unplaced Scaffold NW_012160615.1 (645041..648857, complement)

NW_012160615.1Genomic Context describing neighboring genes Neighboring gene ragulator complex protein LAMTOR2 Neighboring gene BTB/POZ domain-containing protein KCTD5 Neighboring gene glucose-induced degradation protein 4 homolog Neighboring gene forkhead box protein K1 Neighboring gene gamma-tubulin complex component 6 Neighboring gene isoleucine--tRNA ligase, mitochondrial

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012160615.1 Unplaced Scaffold Reference Lhum_UMD_V04

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synaptic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-related protein Rab-40C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Linepithema humile Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lhum_UMD_V04

Genomic

  1. NW_012160615.1 Reference Lhum_UMD_V04

    Range
    645041..648857 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012363026.1 → XP_012218449.1  ras-related protein Rab-40C

    Related
    XP_012218449.1, XM_012363026.1
    Conserved Domains (3) summary
    smart00175
    Location:35 → 195
    RAB; Rab subfamily of small GTPases
    cd03742
    Location:205 → 247
    SOCS_Rab40; SOCS (suppressors of cytokine signaling) box of Rab40-like proteins. Rab40 is part of the Rab family of small GTP-binding proteins that form the largest family within the Ras superfamily. Rab proteins regulate vesicular trafficking pathways, behaving as ...
    cl21455
    Location:29 → 201
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
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