U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

AICDA activation induced cytidine deaminase [ Macaca nemestrina (pig-tailed macaque) ]

Gene ID: 105499877, updated on 13-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
AICDA
Gene description
activation induced cytidine deaminase
See related
Ensembl:ENSMNEG00000043421
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca nemestrina
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Mnem_1.0 (GCF_000956065.1) Unplaced Scaffold NW_012012355.1 (494131..503837, complement)

NW_012012355.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105499875 Neighboring gene uncharacterized LOC105499876 Neighboring gene trifunctional enzyme subunit alpha, mitochondrial pseudogene Neighboring gene microfibril associated protein 5

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_012012355 Unplaced Scaffold Reference Mnem_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cytidine deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables deoxycytidine deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA cytosine deamination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA demethylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cytidine to uridine editing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in defense response to virus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of single stranded viral RNA replication via double stranded DNA intermediate IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in P-body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
single-stranded DNA cytosine deaminase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Macaca nemestrina Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mnem_1.0

Genomic

  1. NW_012012355.1 Reference Mnem_1.0

    Range
    494131..503837 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024787076.1 → XP_024642844.1  single-stranded DNA cytosine deaminase isoform X3

    UniProtKB/TrEMBL
    A0A2K6DZ75
    Related
    ENSMNEP00000041216.1, ENSMNET00000065713.1
    Conserved Domains (1) summary
    pfam08210
    Location:11 → 142
    APOBEC_N; APOBEC-like N-terminal domain

  2. XM_011772703.1 → XP_011771005.1  single-stranded DNA cytosine deaminase isoform X2

    See identical proteins and their annotated locations for XP_011771005.1

    UniProtKB/TrEMBL
    A0A2K6DZ76
    Conserved Domains (1) summary
    pfam18778
    Location:5 → 170
    NAD1; Novel AID APOBEC clade 1

  3. XM_011772702.1 → XP_011771004.1  single-stranded DNA cytosine deaminase isoform X1

    See identical proteins and their annotated locations for XP_011771004.1

    UniProtKB/TrEMBL
    A0A2K6DZ52, A0A2K6DZ76
    Related
    ENSMNEP00000041194.1, ENSMNET00000065691.1
    Conserved Domains (1) summary
    pfam18778
    Location:5 → 180
    NAD1; Novel AID APOBEC clade 1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.