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DHX38 DEAH-box helicase 38 [ Macaca nemestrina (pig-tailed macaque) ]

Gene ID: 105491322, updated on 13-Mar-2024

Summary

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Gene symbol
DHX38
Gene description
DEAH-box helicase 38
See related
Ensembl:ENSMNEG00000045083
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca nemestrina
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
28
Annotation release Status Assembly Chr Location
101 current Mnem_1.0 (GCF_000956065.1) Unplaced Scaffold NW_012011355.1 (11388082..11407587)

NW_012011355.1Genomic Context describing neighboring genes Neighboring gene thioredoxin like 4B Neighboring gene haptoglobin-like Neighboring gene haptoglobin Neighboring gene polyamine modulated factor 1 binding protein 1 Neighboring gene uncharacterized LOC105491331 Neighboring gene uncharacterized LOC105491332

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012011355 Unplaced Scaffold Reference Mnem_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular anatomical structure IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca nemestrina Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mnem_1.0

Genomic

  1. NW_012011355.1 Reference Mnem_1.0

    Range
    11388082..11407587
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011757636.1 → XP_011755938.1  pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16

    See identical proteins and their annotated locations for XP_011755938.1

    UniProtKB/TrEMBL
    A0A2K6EAC9, A0A2K6EAE2
    Related
    ENSMNEP00000045126.1, ENSMNET00000069637.1
    Conserved Domains (1) summary
    COG1643
    Location:515 → 1146
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]

  2. XM_011757640.1 → XP_011755942.1  pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16

    See identical proteins and their annotated locations for XP_011755942.1

    UniProtKB/TrEMBL
    A0A2K6EAC9, A0A2K6EAE2
    Conserved Domains (1) summary
    COG1643
    Location:515 → 1146
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]

  3. XM_011757637.2 → XP_011755939.1  pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16

    See identical proteins and their annotated locations for XP_011755939.1

    UniProtKB/TrEMBL
    A0A2K6EAC9, A0A2K6EAE2
    Related
    ENSMNEP00000045130.1, ENSMNET00000069641.1
    Conserved Domains (1) summary
    COG1643
    Location:515 → 1146
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]

  4. XM_011757638.1 → XP_011755940.1  pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16

    See identical proteins and their annotated locations for XP_011755940.1

    UniProtKB/TrEMBL
    A0A2K6EAC9, A0A2K6EAE2
    Conserved Domains (1) summary
    COG1643
    Location:515 → 1146
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version

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