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LOC105046031 calcium-binding protein CML42 [ Elaeis guineensis (African oil palm) ]

Gene ID: 105046031, updated on 21-Dec-2023

Summary

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Gene symbol
LOC105046031
Gene description
calcium-binding protein CML42
Gene type
protein coding
RefSeq status
MODEL
Organism
Elaeis guineensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Genomic context

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Location:
chromosome: 5
Exon count:
1
Annotation release Status Assembly Chr Location
102 current EG5 (GCF_000442705.1) 5 NC_025997.1 (41899436..41900403, complement)

Chromosome 5 - NC_025997.1Genomic Context describing neighboring genes Neighboring gene reticulon-like protein B1 Neighboring gene uncharacterized LOC105046032 Neighboring gene uncharacterized LOC109505851 Neighboring gene transfer RNA leucine (anticodon CAA)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_025997.1 Chromosome 5 Reference EG5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calcium-binding protein CML42

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Elaeis guineensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EG5 Primary Assembly

Genomic

  1. NC_025997.1 Reference EG5 Primary Assembly

    Range
    41899436..41900403 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010924514.3 → XP_010922816.1  calcium-binding protein CML42

    UniProtKB/TrEMBL
    A0A6I9RAY1
    Conserved Domains (3) summary
    cd00051
    Location:117 → 178
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    pfam13405
    Location:31 → 60
    EF-hand_6; EF-hand domain
    pfam13499
    Location:115 → 177
    EF-hand_7; EF-hand domain pair
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases