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Oasl 2'-5'-oligoadenylate synthetase like [ Fukomys damarensis (Damara mole-rat) ]

Gene ID: 104848186, updated on 12-Mar-2024

Summary

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Gene symbol
Oasl
Gene description
2'-5'-oligoadenylate synthetase like
Locus tag
H920_14960
See related
Ensembl:ENSFDAG00000014734
Gene type
protein coding
RefSeq status
MODEL
Organism
Fukomys damarensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Fukomys
Orthologs
human all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
102 current DMR_v1.0_HiC (GCF_012274545.1) Unplaced Scaffold NW_022900924.1 (9205212..9225008)
101 previous assembly DMR_v1.0 (GCF_000743615.1) Unplaced Scaffold NW_011046367.1 (9262389..9282185)

NW_022900924.1Genomic Context describing neighboring genes Neighboring gene piwi like RNA-mediated gene silencing 3 Neighboring gene nascent polypeptide-associated complex subunit alpha-like Neighboring gene 2'-5'-oligoadenylate synthase-like protein 2 Neighboring gene 5S ribosomal RNA Neighboring gene chromosome unknown C12orf43 homolog Neighboring gene HNF1 homeobox A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables double-stranded RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleotidyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in defense response to virus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of viral genome replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of ribonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2'-5'-oligoadenylate synthase-like protein
Names
59 kDa 2'-5'-oligoadenylate synthase-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fukomys damarensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DMR_v1.0_HiC Primary Assembly

Genomic

  1. NW_022900924.1 Reference DMR_v1.0_HiC Primary Assembly

    Range
    9205212..9225008
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010604027.2 → XP_010602329.1  2'-5'-oligoadenylate synthase-like protein isoform X1

    See identical proteins and their annotated locations for XP_010602329.1

    UniProtKB/TrEMBL
    A0A091DLU5
    Related
    ENSFDAP00000005834.1, ENSFDAT00000019233.1
    Conserved Domains (5) summary
    cd05400
    Location:29 → 212
    NT_2-5OAS_ClassI-CCAase; Nucleotidyltransferase (NT) domain of 2'5'-oligoadenylate (2-5A)synthetase (2-5OAS) and class I CCA-adding enzyme
    smart00213
    Location:434 → 502
    UBQ; Ubiquitin homologues
    pfam00240
    Location:439 → 505
    ubiquitin; Ubiquitin family
    pfam10421
    Location:167 → 350
    OAS1_C; 2'-5'-oligoadenylate synthetase 1, domain 2, C-terminus
    cl00155
    Location:354 → 433
    UBQ; Ubiquitin-like proteins

  2. XM_010604028.1 → XP_010602330.1  2'-5'-oligoadenylate synthase-like protein isoform X2

    Conserved Domains (2) summary
    cd05400
    Location:29 → 212
    NT_2-5OAS_ClassI-CCAase; Nucleotidyltransferase (NT) domain of 2'5'-oligoadenylate (2-5A)synthetase (2-5OAS) and class I CCA-adding enzyme
    pfam10421
    Location:167 → 231
    OAS1_C; 2'-5'-oligoadenylate synthetase 1, domain 2, C-terminus
Nucleotide Protein
Heading Accession and Version

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