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EHMT1 euchromatic histone lysine methyltransferase 1 [ Corvus cornix cornix ]

Gene ID: 104688230, updated on 12-Mar-2024

Summary

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Gene symbol
EHMT1
Gene description
euchromatic histone lysine methyltransferase 1
See related
EnsemblRapid:ENSCCCG00025004658
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus cornix cornix (sub-species: cornix)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 17
Exon count:
35
Annotation release Status Assembly Chr Location
104 current ASM73873v5 (GCF_000738735.5) 17 NC_046346.1 (9195651..9311958, complement)
101 previous assembly Hooded_Crow_genome (GCF_000738735.1) Unplaced Scaffold NW_010959408.1 (1728342..1837706)

Chromosome 17 - NC_046346.1Genomic Context describing neighboring genes Neighboring gene collagen alpha-1(I) chain-like Neighboring gene voltage-dependent N-type calcium channel subunit alpha-1B Neighboring gene arrestin domain containing 1 Neighboring gene glutamine synthetase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone H3K9 methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables p53 binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone-lysine N-methyltransferase EHMT1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus cornix cornix Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM73873v5 Primary Assembly

Genomic

  1. NC_046346.1 Reference ASM73873v5 Primary Assembly

    Range
    9195651..9311958 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010397611.3 → XP_010395913.2  histone-lysine N-methyltransferase EHMT1 isoform X1

    Related
    ENSCCCP00025008642.1, ENSCCCT00025009706.1
    Conserved Domains (5) summary
    COG0666
    Location:811 → 1024
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:840 → 871
    ANK; ANK repeat [structural motif]
    cd10535
    Location:1071 → 1301
    SET_EHMT1; SET domain (including pre-SET and post-SET domains) found in euchromatic histone-lysine N-methyltransferase 1 (EHMT1) and similar proteins
    pfam12796
    Location:845 → 938
    Ank_2; Ankyrin repeats (3 copies)
    cd20905
    Location:552 → 682
    EHMT_ZBD; Zinc-binding domain of euchromatic histone lysine methyltransferases EHMT1 and EHTM2

  2. XM_039561527.1 → XP_039417461.1  histone-lysine N-methyltransferase EHMT1 isoform X5

    Related
    ENSCCCP00025008702.1, ENSCCCT00025009794.1
    Conserved Domains (5) summary
    COG0666
    Location:787 → 1000
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:816 → 847
    ANK; ANK repeat [structural motif]
    cd10535
    Location:1047 → 1277
    SET_EHMT1; SET domain (including pre-SET and post-SET domains) found in euchromatic histone-lysine N-methyltransferase 1 (EHMT1) and similar proteins
    pfam12796
    Location:821 → 914
    Ank_2; Ankyrin repeats (3 copies)
    cd20905
    Location:528 → 658
    EHMT_ZBD; Zinc-binding domain of euchromatic histone lysine methyltransferases EHMT1 and EHTM2

  3. XM_019284987.2 → XP_019140532.2  histone-lysine N-methyltransferase EHMT1 isoform X8

    Conserved Domains (5) summary
    COG0666
    Location:766 → 979
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:795 → 826
    ANK; ANK repeat [structural motif]
    cd10535
    Location:1026 → 1256
    SET_EHMT1; SET domain (including pre-SET and post-SET domains) found in euchromatic histone-lysine N-methyltransferase 1 (EHMT1) and similar proteins
    pfam12796
    Location:800 → 893
    Ank_2; Ankyrin repeats (3 copies)
    cd20905
    Location:507 → 637
    EHMT_ZBD; Zinc-binding domain of euchromatic histone lysine methyltransferases EHMT1 and EHTM2

  4. XM_010397620.3 → XP_010395922.2  histone-lysine N-methyltransferase EHMT1 isoform X8

    Conserved Domains (5) summary
    COG0666
    Location:766 → 979
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:795 → 826
    ANK; ANK repeat [structural motif]
    cd10535
    Location:1026 → 1256
    SET_EHMT1; SET domain (including pre-SET and post-SET domains) found in euchromatic histone-lysine N-methyltransferase 1 (EHMT1) and similar proteins
    pfam12796
    Location:800 → 893
    Ank_2; Ankyrin repeats (3 copies)
    cd20905
    Location:507 → 637
    EHMT_ZBD; Zinc-binding domain of euchromatic histone lysine methyltransferases EHMT1 and EHTM2

  5. XM_039561525.1 → XP_039417459.1  histone-lysine N-methyltransferase EHMT1 isoform X2

    Conserved Domains (5) summary
    COG0666
    Location:807 → 1020
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:836 → 867
    ANK; ANK repeat [structural motif]
    cd10535
    Location:1067 → 1297
    SET_EHMT1; SET domain (including pre-SET and post-SET domains) found in euchromatic histone-lysine N-methyltransferase 1 (EHMT1) and similar proteins
    pfam12796
    Location:841 → 934
    Ank_2; Ankyrin repeats (3 copies)
    cd20905
    Location:548 → 678
    EHMT_ZBD; Zinc-binding domain of euchromatic histone lysine methyltransferases EHMT1 and EHTM2

  6. XM_039561529.1 → XP_039417463.1  histone-lysine N-methyltransferase EHMT1 isoform X9

    Conserved Domains (5) summary
    COG0666
    Location:763 → 976
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:792 → 823
    ANK; ANK repeat [structural motif]
    cd10535
    Location:1023 → 1253
    SET_EHMT1; SET domain (including pre-SET and post-SET domains) found in euchromatic histone-lysine N-methyltransferase 1 (EHMT1) and similar proteins
    pfam12796
    Location:797 → 890
    Ank_2; Ankyrin repeats (3 copies)
    cd20905
    Location:552 → 634
    EHMT_ZBD; Zinc-binding domain of euchromatic histone lysine methyltransferases EHMT1 and EHTM2

  7. XM_039561530.1 → XP_039417464.1  histone-lysine N-methyltransferase EHMT1 isoform X10

    Related
    ENSCCCP00025008686.1, ENSCCCT00025009769.1
    Conserved Domains (5) summary
    COG0666
    Location:749 → 962
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:778 → 809
    ANK; ANK repeat [structural motif]
    cd10535
    Location:1009 → 1239
    SET_EHMT1; SET domain (including pre-SET and post-SET domains) found in euchromatic histone-lysine N-methyltransferase 1 (EHMT1) and similar proteins
    pfam12796
    Location:783 → 876
    Ank_2; Ankyrin repeats (3 copies)
    cd20905
    Location:538 → 620
    EHMT_ZBD; Zinc-binding domain of euchromatic histone lysine methyltransferases EHMT1 and EHTM2

  8. XM_039561526.1 → XP_039417460.1  histone-lysine N-methyltransferase EHMT1 isoform X4

    Related
    ENSCCCP00025008653.1, ENSCCCT00025009719.1
    Conserved Domains (5) summary
    COG0666
    Location:797 → 1010
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:826 → 857
    ANK; ANK repeat [structural motif]
    cd10535
    Location:1057 → 1287
    SET_EHMT1; SET domain (including pre-SET and post-SET domains) found in euchromatic histone-lysine N-methyltransferase 1 (EHMT1) and similar proteins
    pfam12796
    Location:831 → 924
    Ank_2; Ankyrin repeats (3 copies)
    cd20905
    Location:538 → 668
    EHMT_ZBD; Zinc-binding domain of euchromatic histone lysine methyltransferases EHMT1 and EHTM2

  9. XM_010397617.3 → XP_010395919.2  histone-lysine N-methyltransferase EHMT1 isoform X7

    Related
    ENSCCCP00025008631.1, ENSCCCT00025009692.1
    Conserved Domains (5) summary
    COG0666
    Location:782 → 995
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:811 → 842
    ANK; ANK repeat [structural motif]
    cd10535
    Location:1042 → 1272
    SET_EHMT1; SET domain (including pre-SET and post-SET domains) found in euchromatic histone-lysine N-methyltransferase 1 (EHMT1) and similar proteins
    pfam12796
    Location:816 → 909
    Ank_2; Ankyrin repeats (3 copies)
    cd20905
    Location:523 → 653
    EHMT_ZBD; Zinc-binding domain of euchromatic histone lysine methyltransferases EHMT1 and EHTM2

  10. XM_010397612.3 → XP_010395914.2  histone-lysine N-methyltransferase EHMT1 isoform X3

    Related
    ENSCCCP00025008615.1, ENSCCCT00025009676.1
    Conserved Domains (5) summary
    COG0666
    Location:801 → 1014
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:830 → 861
    ANK; ANK repeat [structural motif]
    cd10535
    Location:1061 → 1291
    SET_EHMT1; SET domain (including pre-SET and post-SET domains) found in euchromatic histone-lysine N-methyltransferase 1 (EHMT1) and similar proteins
    pfam12796
    Location:835 → 928
    Ank_2; Ankyrin repeats (3 copies)
    cd20905
    Location:542 → 672
    EHMT_ZBD; Zinc-binding domain of euchromatic histone lysine methyltransferases EHMT1 and EHTM2

  11. XM_010397619.3 → XP_010395921.2  histone-lysine N-methyltransferase EHMT1 isoform X8

    Conserved Domains (5) summary
    COG0666
    Location:766 → 979
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:795 → 826
    ANK; ANK repeat [structural motif]
    cd10535
    Location:1026 → 1256
    SET_EHMT1; SET domain (including pre-SET and post-SET domains) found in euchromatic histone-lysine N-methyltransferase 1 (EHMT1) and similar proteins
    pfam12796
    Location:800 → 893
    Ank_2; Ankyrin repeats (3 copies)
    cd20905
    Location:507 → 637
    EHMT_ZBD; Zinc-binding domain of euchromatic histone lysine methyltransferases EHMT1 and EHTM2

  12. XM_019284988.2 → XP_019140533.2  histone-lysine N-methyltransferase EHMT1 isoform X8

    Related
    ENSCCCP00025008665.1, ENSCCCT00025009736.1
    Conserved Domains (5) summary
    COG0666
    Location:766 → 979
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:795 → 826
    ANK; ANK repeat [structural motif]
    cd10535
    Location:1026 → 1256
    SET_EHMT1; SET domain (including pre-SET and post-SET domains) found in euchromatic histone-lysine N-methyltransferase 1 (EHMT1) and similar proteins
    pfam12796
    Location:800 → 893
    Ank_2; Ankyrin repeats (3 copies)
    cd20905
    Location:507 → 637
    EHMT_ZBD; Zinc-binding domain of euchromatic histone lysine methyltransferases EHMT1 and EHTM2

  13. XM_010397616.3 → XP_010395918.2  histone-lysine N-methyltransferase EHMT1 isoform X6

    Related
    ENSCCCP00025008601.1, ENSCCCT00025009662.1
    Conserved Domains (5) summary
    COG0666
    Location:783 → 996
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:812 → 843
    ANK; ANK repeat [structural motif]
    cd10535
    Location:1043 → 1273
    SET_EHMT1; SET domain (including pre-SET and post-SET domains) found in euchromatic histone-lysine N-methyltransferase 1 (EHMT1) and similar proteins
    pfam12796
    Location:817 → 910
    Ank_2; Ankyrin repeats (3 copies)
    cd20905
    Location:524 → 654
    EHMT_ZBD; Zinc-binding domain of euchromatic histone lysine methyltransferases EHMT1 and EHTM2
Nucleotide Protein
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