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HIVEP2 HIVEP zinc finger 2 [ Chaetura pelagica (chimney swift) ]

Gene ID: 104389526, updated on 12-Mar-2024

Summary

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Gene symbol
HIVEP2
Gene description
HIVEP zinc finger 2
Locus tag
M959_10303
Gene type
protein coding
RefSeq status
MODEL
Organism
Chaetura pelagica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Caprimulgimorphae; Apodiformes; Apodidae; Apodinae; Chaetura
Orthologs
human mouse all
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Genomic context

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See HIVEP2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current ChaPel_1.0 (GCF_000747805.1) Unplaced Scaffold NW_009953483.1 (1518761..1543959, complement)

NW_009953483.1Genomic Context describing neighboring genes Neighboring gene vesicle trafficking 1 Neighboring gene adhesion G protein-coupled receptor G6 Neighboring gene androgen induced 1 Neighboring gene adenosine deaminase tRNA specific 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009953483.1 Unplaced Scaffold Reference ChaPel_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor HIVEP2
Names
Transcription factor HIVEP2
human immunodeficiency virus type I enhancer binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chaetura pelagica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChaPel_1.0

Genomic

  1. NW_009953483.1 Reference ChaPel_1.0

    Range
    1518761..1543959 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009998530.1 → XP_009996832.1  transcription factor HIVEP2 isoform X1

    Conserved Domains (4) summary
    sd00017
    Location:248 → 268
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:1876 → 1896
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:1874 → 1896
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:261 → 285
    zf-H2C2_2; Zinc-finger double domain

  2. XM_009998531.1 → XP_009996833.1  transcription factor HIVEP2 isoform X2

    Conserved Domains (4) summary
    sd00017
    Location:191 → 211
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:1819 → 1839
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:1817 → 1839
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:204 → 228
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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