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LOC103947590 germinal center kinase 1 [ Pyrus x bretschneideri (Chinese white pear) ]

Gene ID: 103947590, updated on 30-Nov-2023

Summary

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Gene symbol
LOC103947590
Gene description
germinal center kinase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Pyrus x bretschneideri
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Genomic context

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Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
102 current Pyrus_bretschneideri_v1 (GCF_019419815.1) Unplaced Scaffold NW_025999535.1 (4632233..4641540, complement)
101 previous assembly Pbr_v1.0 (GCF_000315295.1) Unplaced Scaffold NW_008988087.1 (481699..490919, complement)

NW_025999535.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125478000 Neighboring gene PRA1 family protein H Neighboring gene protein RICE SALT SENSITIVE 3 Neighboring gene uncharacterized LOC103947662

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
germinal center kinase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pyrus x bretschneideri Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pyrus_bretschneideri_v1

Genomic

  1. NW_025999535.1 Reference Pyrus_bretschneideri_v1

    Range
    4632233..4641540 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009358506.3 → XP_009356781.1  germinal center kinase 1

    Conserved Domains (2) summary
    smart00220
    Location:15 → 267
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd06609
    Location:13 → 286
    STKc_MST3_like; Catalytic domain of Mammalian Ste20-like protein kinase 3-like Serine/Threonine Kinases
Nucleotide Protein
Heading Accession and Version

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