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RNF149 ring finger protein 149 [ Serinus canaria (Common canary) ]

Gene ID: 103812643, updated on 11-Mar-2024

Summary

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Gene symbol
RNF149
Gene description
ring finger protein 149
See related
EnsemblRapid:ENSSCAG00000000141
Gene type
protein coding
RefSeq status
MODEL
Organism
Serinus canaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Fringillidae; Carduelinae; Serinus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_02 current serCan2020 (GCF_022539315.1) 1 NC_066313.1 (84787485..84810122, complement)

Chromosome 1 - NC_066313.1Genomic Context describing neighboring genes Neighboring gene TBC1 domain family member 8 Neighboring gene CCR4-NOT transcription complex subunit 11 Neighboring gene small nucleolar RNA SNORD89 Neighboring gene cellular repressor of E1A stimulated genes 2 Neighboring gene regulatory factor X8

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066313.1 Chromosome 1 Reference serCan2020 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
E3 ubiquitin-protein ligase RNF149

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022539315.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference serCan2020 Primary Assembly

Genomic

  1. NC_066313.1 Reference serCan2020 Primary Assembly

    Range
    84787485..84810122 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030233953.2 → XP_030089813.1  E3 ubiquitin-protein ligase RNF149

    Related
    ENSSCAP00000000156.2, ENSSCAT00000000173.2
    Conserved Domains (3) summary
    COG5540
    Location:181 → 315
    COG5540; RING-finger-containing ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
    cd02122
    Location:41 → 187
    PA_GRAIL_like; PA _GRAIL_like: Protease-associated (PA) domain GRAIL-like. This group includes PA domain containing E3 (ubiquitin ligases) similar to human GRAIL (gene related to anergy in lymphocytes) protein. Proteins in this group contain a C3H2C3 RING finger. E3 ...
    cd16668
    Location:270 → 317
    RING-H2_GRAIL; RING finger, H2 subclass, found in the GRAIL transmembrane proteins family
Nucleotide Protein
Heading Accession and Version

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