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FXYD2 FXYD domain containing ion transport regulator 2 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 103796045, updated on 11-Mar-2024

Summary

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Gene symbol
FXYD2
Gene description
FXYD domain containing ion transport regulator 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 11
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 11 NC_071452.1 (15245656..15257802, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 11 NC_048393.1 (15202296..15214367, complement)

Chromosome 11 - NC_071452.1Genomic Context describing neighboring genes Neighboring gene DS cell adhesion molecule like 1 Neighboring gene uncharacterized LOC128929083 Neighboring gene uncharacterized LOC103796044 Neighboring gene FXYD domain containing ion transport regulator 6 Neighboring gene transmembrane serine protease 13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sodium channel regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in monoatomic ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of sodium ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sodium/potassium-transporting ATPase subunit gamma

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071452.1 Reference mCalJa1.2.pat.X

    Range
    15245656..15257802 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009006890.3 → XP_009005138.1  sodium/potassium-transporting ATPase subunit gamma isoform X4

    Conserved Domains (1) summary
    pfam02038
    Location:15 → 57
    ATP1G1_PLM_MAT8; ATP1G1/PLM/MAT8 family

  2. XM_009006889.3 → XP_009005137.1  sodium/potassium-transporting ATPase subunit gamma isoform X3

    Conserved Domains (1) summary
    pfam02038
    Location:47 → 89
    ATP1G1_PLM_MAT8; ATP1G1/PLM/MAT8 family

  3. XM_017977564.2 → XP_017833053.1  sodium/potassium-transporting ATPase subunit gamma isoform X2

  4. XM_035264710.2 → XP_035120601.1  sodium/potassium-transporting ATPase subunit gamma isoform X5

    Conserved Domains (1) summary
    cd20318
    Location:8 → 47
    FXYD2; FXYD domain-containing ion transport regulator 2

  5. XM_009006887.4 → XP_009005135.1  sodium/potassium-transporting ATPase subunit gamma isoform X1

    Conserved Domains (1) summary
    pfam02038
    Location:47 → 78
    ATP1G1_PLM_MAT8; ATP1G1/PLM/MAT8 family
Nucleotide Protein
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