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Hey1 hes related family bHLH transcription factor with YRPW motif 1 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103727947, updated on 11-Mar-2024

Summary

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Gene symbol
Hey1
Gene description
hes related family bHLH transcription factor with YRPW motif 1
See related
Ensembl:ENSNGAG00000019231
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008360329.1 (2895760..2899572, complement)

NW_008360329.1Genomic Context describing neighboring genes Neighboring gene aldose reductase-related protein 2 pseudogene Neighboring gene 40S ribosomal protein S24 pseudogene Neighboring gene U7 small nuclear RNA Neighboring gene U6 spliceosomal RNA Neighboring gene mitochondrial ribosomal protein S28

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008360329 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in anterior/posterior pattern specification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in circulatory system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of neurogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hairy/enhancer-of-split related with YRPW motif protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008360329.1 Reference S.galili_v1.0 Primary Assembly

    Range
    2895760..2899572 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029560168.1 → XP_029416028.1  hairy/enhancer-of-split related with YRPW motif protein 1 isoform X1

    Conserved Domains (2) summary
    smart00511
    Location:124 → 170
    ORANGE; Orange domain
    cl00081
    Location:41 → 126
    bHLH_SF; basic Helix Loop Helix (bHLH) domain superfamily

  2. XM_008826061.3 → XP_008824283.1  hairy/enhancer-of-split related with YRPW motif protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C6WAG6
    Related
    ENSNGAP00000019396.1, ENSNGAT00000025058.1
    Conserved Domains (2) summary
    smart00511
    Location:120 → 166
    ORANGE; Orange domain
    cl00081
    Location:41 → 122
    bHLH_SF; basic Helix Loop Helix (bHLH) domain superfamily
Nucleotide Protein
Heading Accession and Version

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