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ZCRB1 zinc finger CCHC-type and RNA binding motif containing 1 [ Ursus maritimus (polar bear) ]

Gene ID: 103675398, updated on 11-Mar-2024

Summary

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Gene symbol
ZCRB1
Gene description
zinc finger CCHC-type and RNA binding motif containing 1
See related
Ensembl:ENSUMAG00000024199
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus maritimus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
101 current ASM1731132v1 (GCF_017311325.1) Unplaced Scaffold NW_024425119.1 (33712330..33728440, complement)
100 previous assembly UrsMar_1.0 (GCF_000687225.1) Unplaced Scaffold NW_007907231.1 (4018672..4034707, complement)

NW_024425119.1Genomic Context describing neighboring genes Neighboring gene glucoside xylosyltransferase 1 Neighboring gene YY1 associated factor 2 Neighboring gene translation initiation factor IF-2-like Neighboring gene 60S ribosomal protein L12-like Neighboring gene periphilin 1 Neighboring gene prickle planar cell polarity protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U12-type spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger CCHC-type and RNA-binding motif-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ursus maritimus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1731132v1 Primary Assembly

Genomic

  1. NW_024425119.1 Reference ASM1731132v1 Primary Assembly

    Range
    33712330..33728440 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008704456.2 → XP_008702678.1  zinc finger CCHC-type and RNA-binding motif-containing protein 1 isoform X1

    See identical proteins and their annotated locations for XP_008702678.1

    UniProtKB/TrEMBL
    A0A384D6I5
    Related
    ENSUMAP00000033590.1
    Conserved Domains (2) summary
    cd12393
    Location:9 → 86
    RRM_ZCRB1; RNA recognition motif in Zinc finger CCHC-type and RNA-binding motif-containing protein 1 (ZCRB1) and similar proteins
    cl26705
    Location:97 → 123
    AIR1; Arginine methyltransferase-interacting protein, contains RING Zn-finger [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

  2. XM_008704457.2 → XP_008702679.1  zinc finger CCHC-type and RNA-binding motif-containing protein 1 isoform X2

    See identical proteins and their annotated locations for XP_008702679.1

    UniProtKB/TrEMBL
    A0A384D7C6
    Conserved Domains (2) summary
    cl17169
    Location:1 → 45
    RRM_SF; RNA recognition motif (RRM) superfamily
    cl26705
    Location:56 → 82
    AIR1; Arginine methyltransferase-interacting protein, contains RING Zn-finger [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Nucleotide Protein
Heading Accession and Version

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