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SHQ1 SHQ1, H/ACA ribonucleoprotein assembly factor [ Ursus maritimus (polar bear) ]

Gene ID: 103674256, updated on 11-Mar-2024

Summary

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Gene symbol
SHQ1
Gene description
SHQ1, H/ACA ribonucleoprotein assembly factor
See related
Ensembl:ENSUMAG00000024031
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus maritimus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
101 current ASM1731132v1 (GCF_017311325.1) Unplaced Scaffold NW_024423786.1 (19143859..19470482)
100 previous assembly UrsMar_1.0 (GCF_000687225.1) Unplaced Scaffold NW_007907211.1 (13370444..13471652, complement)

NW_024423786.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase 4 regulatory subunit 2 Neighboring gene glucoside xylosyltransferase 2 Neighboring gene ferritin light chain-like Neighboring gene U2 spliceosomal RNA Neighboring gene yrdC domain-containing protein, mitochondrial-like Neighboring gene small nucleolar RNA SNORA62/SNORA6 family Neighboring gene RING1 and YY1 binding protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in box H/ACA snoRNP assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein SHQ1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ursus maritimus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1731132v1 Primary Assembly

Genomic

  1. NW_024423786.1 Reference ASM1731132v1 Primary Assembly

    Range
    19143859..19470482
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040628549.1 → XP_040484483.1  protein SHQ1 homolog isoform X2

    UniProtKB/TrEMBL
    A0A8M1FM77
    Conserved Domains (1) summary
    cd06463
    Location:9 → 84
    p23_like; Proteins containing this p23_like domain include p23 and its Saccharomyces cerevisiae (Sc) homolog Sba1. Both are co-chaperones for the heat shock protein (Hsp) 90. p23 binds Hsp90 and participates in the folding of a number of Hsp90 clients, including ...

  2. XM_040628550.1 → XP_040484484.1  protein SHQ1 homolog isoform X3

    UniProtKB/TrEMBL
    A0A8M1FW30
    Conserved Domains (1) summary
    cd06463
    Location:9 → 84
    p23_like; Proteins containing this p23_like domain include p23 and its Saccharomyces cerevisiae (Sc) homolog Sba1. Both are co-chaperones for the heat shock protein (Hsp) 90. p23 binds Hsp90 and participates in the folding of a number of Hsp90 clients, including ...

  3. XM_040628552.1 → XP_040484486.1  protein SHQ1 homolog isoform X5

    UniProtKB/TrEMBL
    A0A8M1FM91
    Conserved Domains (1) summary
    cd06463
    Location:9 → 84
    p23_like; Proteins containing this p23_like domain include p23 and its Saccharomyces cerevisiae (Sc) homolog Sba1. Both are co-chaperones for the heat shock protein (Hsp) 90. p23 binds Hsp90 and participates in the folding of a number of Hsp90 clients, including ...

  4. XM_040628551.1 → XP_040484485.1  protein SHQ1 homolog isoform X4

    UniProtKB/TrEMBL
    A0A8M1FQ38
    Conserved Domains (1) summary
    cd06463
    Location:9 → 84
    p23_like; Proteins containing this p23_like domain include p23 and its Saccharomyces cerevisiae (Sc) homolog Sba1. Both are co-chaperones for the heat shock protein (Hsp) 90. p23 binds Hsp90 and participates in the folding of a number of Hsp90 clients, including ...

  5. XM_008703143.2 → XP_008701365.2  protein SHQ1 homolog isoform X1

    UniProtKB/TrEMBL
    A0A384D3P9, A0A452VI69
    Conserved Domains (1) summary
    cd06463
    Location:9 → 84
    p23_like; Proteins containing this p23_like domain include p23 and its Saccharomyces cerevisiae (Sc) homolog Sba1. Both are co-chaperones for the heat shock protein (Hsp) 90. p23 binds Hsp90 and participates in the folding of a number of Hsp90 clients, including ...
Nucleotide Protein
Heading Accession and Version

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