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ABRAXAS1 abraxas 1, BRCA1 A complex subunit [ Ursus maritimus (polar bear) ]

Gene ID: 103665421, updated on 11-Mar-2024

Summary

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Gene symbol
ABRAXAS1
Gene description
abraxas 1, BRCA1 A complex subunit
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus maritimus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Also known as
FAM175A
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current ASM1731132v1 (GCF_017311325.1) Unplaced Scaffold NW_024426996.1 (17036681..17054014)
100 previous assembly UrsMar_1.0 (GCF_000687225.1) Unplaced Scaffold NW_007907130.1 (11178163..11194029, complement)

NW_024426996.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene glycerol-3-phosphate acyltransferase 3 Neighboring gene uncharacterized LOC121101443 Neighboring gene mitochondrial ribosomal protein S18C Neighboring gene helicase, POLQ like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in attachment of spindle microtubules to kinetochore IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic spindle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein K63-linked deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
BRCA1-A complex subunit Abraxas 1
Names
family with sequence similarity 175 member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ursus maritimus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1731132v1 Primary Assembly

Genomic

  1. NW_024426996.1 Reference ASM1731132v1 Primary Assembly

    Range
    17036681..17054014
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040625048.1 → XP_040480982.1  BRCA1-A complex subunit Abraxas 1 isoform X1

    UniProtKB/TrEMBL
    A0A8M1FGE0
    Conserved Domains (1) summary
    PRK00409
    Location:284 → 347
    PRK00409; recombination and DNA strand exchange inhibitor protein; Reviewed

  2. XM_040625049.1 → XP_040480983.1  BRCA1-A complex subunit Abraxas 1 isoform X2

    UniProtKB/TrEMBL
    A0A452TU45, A0A8M1FC42
    Conserved Domains (1) summary
    PRK00409
    Location:214 → 277
    PRK00409; recombination and DNA strand exchange inhibitor protein; Reviewed

  3. XM_040625051.1 → XP_040480985.1  BRCA1-A complex subunit Abraxas 1 isoform X4

    UniProtKB/TrEMBL
    A0A452TU45, A0A8M1FFD9
    Conserved Domains (1) summary
    PRK00409
    Location:126 → 189
    PRK00409; recombination and DNA strand exchange inhibitor protein; Reviewed

  4. XM_040625050.1 → XP_040480984.1  BRCA1-A complex subunit Abraxas 1 isoform X3

    UniProtKB/TrEMBL
    A0A452TU45, A0A8M1FK78
    Conserved Domains (1) summary
    PRK00409
    Location:142 → 205
    PRK00409; recombination and DNA strand exchange inhibitor protein; Reviewed

  5. XM_040625052.1 → XP_040480986.1  BRCA1-A complex subunit Abraxas 1 isoform X5

    UniProtKB/TrEMBL
    A0A452TU45, A0A8M1FCA8
    Conserved Domains (1) summary
    PRK00409
    Location:105 → 168
    PRK00409; recombination and DNA strand exchange inhibitor protein; Reviewed
Nucleotide Protein
Heading Accession and Version

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