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ddx1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 [ Cynoglossus semilaevis (tongue sole) ]

Gene ID: 103381072, updated on 11-Mar-2024

Summary

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Gene symbol
ddx1
Gene description
DEAD (Asp-Glu-Ala-Asp) box helicase 1
See related
Ensembl:ENSCSEG00000002630
Gene type
protein coding
RefSeq status
MODEL
Organism
Cynoglossus semilaevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Cynoglossidae; Cynoglossinae; Cynoglossus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 7
Exon count:
26
Annotation release Status Assembly Chr Location
102 current Cse_v1.0 (GCF_000523025.1) 7 NC_024313.1 (8837508..8843112, complement)

Chromosome 7 - NC_024313.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112487241 Neighboring gene glyceronephosphate O-acyltransferase 2 Neighboring gene intersectin 2a Neighboring gene NBAS subunit of NRZ tethering complex Neighboring gene uncharacterized LOC112487217

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024313.1 Chromosome 7 Reference Cse_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-dependent RNA helicase DDX1
Names
DEAD-box helicase 1
DEAD/H-box helicase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cynoglossus semilaevis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cse_v1.0 Primary Assembly

Genomic

  1. NC_024313.1 Reference Cse_v1.0 Primary Assembly

    Range
    8837508..8843112 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008313260.3 → XP_008311482.1  ATP-dependent RNA helicase DDX1

    UniProtKB/TrEMBL
    A0A3P8ULH7
    Related
    ENSCSEP00000004053.1, ENSCSET00000004102.1
    Conserved Domains (4) summary
    COG0513
    Location:257 → 624
    SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
    pfam00271
    Location:493 → 609
    Helicase_C; Helicase conserved C-terminal domain
    cd12873
    Location:93 → 246
    SPRY_DDX1; SPRY domain associated with DEAD box gene DDX1
    cl21455
    Location:270 → 426
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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