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sars1 seryl-tRNA synthetase 1 [ Stegastes partitus (bicolor damselfish) ]

Gene ID: 103371872, updated on 11-Mar-2024

Summary

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Gene symbol
sars1
Gene description
seryl-tRNA synthetase 1
See related
Ensembl:ENSSPAG00000009340
Gene type
protein coding
RefSeq status
MODEL
Organism
Stegastes partitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Stegastes
Also known as
sars
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Stegastes_partitus-1.0.2 (GCF_000690725.1) Unplaced Scaffold NW_007579393.1 (24029..32577, complement)

NW_007579393.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 106C Neighboring gene PTB domain-containing engulfment adapter protein 1-like Neighboring gene interleukin-17 receptor D-like Neighboring gene family with sequence similarity 50 member A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007579393 unplaced scaffold reference Stegastes_partitus-1.0.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in seryl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine--tRNA ligase, cytoplasmic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Stegastes partitus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Stegastes_partitus-1.0.2

Genomic

  1. NW_007579393.1 Reference Stegastes_partitus-1.0.2

    Range
    24029..32577 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008301340.1 → XP_008299562.1  serine--tRNA ligase, cytoplasmic

    UniProtKB/TrEMBL
    A0A3B4ZWZ7
    Related
    ENSSPAP00000012316.1, ENSSPAT00000012529.1
    Conserved Domains (3) summary
    PLN02678
    Location:3 → 486
    PLN02678; seryl-tRNA synthetase
    cd00770
    Location:152 → 460
    SerRS_core; Seryl-tRNA synthetase (SerRS) class II core catalytic domain. SerRS is responsible for the attachment of serine to the 3' OH group of ribose of the appropriate tRNA. This domain It is primarily responsible for ATP-dependent formation of the enzyme bound ...
    pfam02403
    Location:3 → 138
    Seryl_tRNA_N; Seryl-tRNA synthetase N-terminal domain
Nucleotide Protein
Heading Accession and Version

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