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LOC103343508 protein-tyrosine-phosphatase MKP1 [ Prunus mume (Japanese apricot) ]

Gene ID: 103343508, updated on 28-Dec-2023

Summary

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Gene symbol
LOC103343508
Gene description
protein-tyrosine-phosphatase MKP1
Gene type
protein coding
RefSeq status
MODEL
Organism
Prunus mume
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Genomic context

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See LOC103343508 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
101 current P.mume_V1.0 (GCF_000346735.1) Unplaced Scaffold NW_007362608.1 (27466..32339, complement)

NW_007362608.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103343511 Neighboring gene beta-hexosaminidase 1 Neighboring gene beta-hexosaminidase 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007362608.1 Unplaced Scaffold Reference P.mume_V1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein tyrosine/serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein-tyrosine-phosphatase MKP1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Prunus mume Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.mume_V1.0 Primary Assembly

Genomic

  1. NW_007362608.1 Reference P.mume_V1.0 Primary Assembly

    Range
    27466..32339 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008247169.2 → XP_008245391.1  protein-tyrosine-phosphatase MKP1

    Conserved Domains (2) summary
    cd00127
    Location:152 → 289
    DSPc; Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases. Structurally similar to tyrosine-specific phosphatases but with a shallower active site cleft and a distinctive active site signature motif, HCxxGxxR. Characterized as VHR- or ...
    cl15697
    Location:326 → 395
    ADF_gelsolin; Actin depolymerization factor/cofilin- and gelsolin-like domains
Nucleotide Protein
Heading Accession and Version

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