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LOC103322437 endochitinase EP3-like [ Prunus mume (Japanese apricot) ]

Gene ID: 103322437, updated on 28-Dec-2023

Summary

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Gene symbol
LOC103322437
Gene description
endochitinase EP3-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Prunus mume
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Genomic context

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Location:
chromosome: LG2
Exon count:
2
Annotation release Status Assembly LG Location
101 current P.mume_V1.0 (GCF_000346735.1) LG2 NC_024127.1 (25170074..25171497)

Linkage Group LG2 - NC_024127.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103322436 Neighboring gene uncharacterized LOC103322425 Neighboring gene cyclic nucleotide-gated ion channel 1-like Neighboring gene uncharacterized LOC103322427

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024127.1 Chromosome LG2 Reference P.mume_V1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell wall macromolecule catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chitin catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
endochitinase EP3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Prunus mume Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.mume_V1.0 Primary Assembly

Genomic

  1. NC_024127.1 Reference P.mume_V1.0 Primary Assembly

    Range
    25170074..25171497
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008224351.2 → XP_008222573.1  endochitinase EP3-like

    Conserved Domains (2) summary
    cd00325
    Location:31 → 226
    chitinase_glyco_hydro_19; Glycoside hydrolase family 19 chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Family 19 chitinases are found primarily in plants (classes I, III, and IV), but some ...
    pfam00182
    Location:30 → 226
    Glyco_hydro_19; Chitinase class I
Nucleotide Protein
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