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tdh L-threonine dehydrogenase [ Callorhinchus milii (elephant shark) ]

Gene ID: 103185786, updated on 11-Mar-2024

Summary

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Gene symbol
tdh
Gene description
L-threonine dehydrogenase
See related
Ensembl:ENSCMIG00000017292
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinchus milii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
Also known as
tdh2
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704744.1 (26063248..26079745, complement)
100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890177.1 (421337..431300)

NW_024704744.1Genomic Context describing neighboring genes Neighboring gene transcription factor Sox-7-like Neighboring gene PIN2 (TERF1) interacting telomerase inhibitor 1 Neighboring gene myotubularin related protein 9 Neighboring gene XK-related protein 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequencing and analysis of full-length cDNAs, 5'-ESTs and 3'-ESTs from a cartilaginous fish, the elephant shark (Callorhinchus milii). Tan YY, et al. PLoS One, 2012. PMID 23056606, Free PMC Article
  2. Elephant shark genome provides unique insights into gnathostome evolution. Venkatesh B, et al. Nature, 2014 Jan 9. PMID 24402279, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-threonine 3-dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in threonine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
L-threonine dehydrogenase
Names
L-threonine dehydrogenase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IMCB_Cmil_1.0 Primary Assembly

Genomic

  1. NW_024704744.1 Reference IMCB_Cmil_1.0 Primary Assembly

    Range
    26063248..26079745 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042333105.1 → XP_042189039.1  L-threonine dehydrogenase

    UniProtKB/TrEMBL
    A0A4W3JDK5, V9KDM3
    Conserved Domains (1) summary
    cd05272
    Location:59 → 365
    TDH_SDR_e; L-threonine dehydrogenase, extended (e) SDRs
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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