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samd10b sterile alpha motif domain containing 10b [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103040436, updated on 11-Apr-2024

Summary

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Gene symbol
samd10b
Gene description
sterile alpha motif domain containing 10b
See related
EnsemblRapid:ENSAMXG00025026971
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
Also known as
samd10
Orthologs
human zebrafish all
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Genomic context

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See samd10b in Genome Data Viewer
Location:
chromosome: 13
Exon count:
5
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 13 NC_064420.1 (15968428..16091249)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) 15 NC_035911.1 (30116981..30233824)

Chromosome 13 - NC_064420.1Genomic Context describing neighboring genes Neighboring gene ER degradation enhancer, mannosidase alpha-like 2 Neighboring gene PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) Neighboring gene zinc finger protein 512B Neighboring gene uridine-cytidine kinase 1-like 1b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell surface receptor protein tyrosine kinase signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sterile alpha motif domain-containing protein 10
Names
sterile alpha motif domain containing 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064420.1 Reference AstMex3_surface

    Range
    15968428..16091249
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022677537.2 → XP_022533258.1  sterile alpha motif domain-containing protein 10

    UniProtKB/TrEMBL
    A0A8B9K4P2
    Related
    ENSAMXP00025043885.1, ENSAMXT00025056188.1
    Conserved Domains (1) summary
    cd09510
    Location:85 → 145
    SAM_aveugle-like; SAM domain of aveugle-like subfamily
Nucleotide Protein
Heading Accession and Version

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