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mark4a MAP/microtubule affinity-regulating kinase 4a [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103035392, updated on 6-Jun-2024

Summary

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Gene symbol
mark4a
Gene description
MAP/microtubule affinity-regulating kinase 4a
See related
EnsemblRapid:ENSAMXG00025027916
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
Orthologs
zebrafish all
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Genomic context

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See mark4a in Genome Data Viewer
Location:
chromosome: 1
Exon count:
18
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 1 NC_064408.1 (33557393..33602547, complement)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) 3 NC_035899.1 (13414115..13453740, complement)

Chromosome 1 - NC_064408.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125782458 Neighboring gene creatine kinase, muscle a Neighboring gene exocyst complex component 3-like 2a Neighboring gene protein phosphatase 1, regulatory (inhibitor) subunit 14Aa

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tau-protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in microtubule cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
MAP/microtubule affinity-regulating kinase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064408.1 Reference AstMex3_surface

    Range
    33557393..33602547 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022666597.2 → XP_022522318.1  MAP/microtubule affinity-regulating kinase 4 isoform X1

    UniProtKB/TrEMBL
    A0A3B1KHX1, A0A8T2ML21
    Related
    ENSAMXP00025047699.1, ENSAMXT00025060566.1
    Conserved Domains (3) summary
    cd14072
    Location:57 → 309
    STKc_MARK; Catalytic domain of the Serine/Threonine Kinases, MAP/microtubule affinity-regulating kinases
    cl17070
    Location:686 → 766
    AMPKA_C_like; C-terminal regulatory domain of 5'-AMP-activated protein kinase (AMPK) alpha subunit and similar domains
    cl21463
    Location:327 → 369
    UBA_like_SF; UBA domain-like superfamily

  2. XM_022666606.2 → XP_022522327.1  MAP/microtubule affinity-regulating kinase 4 isoform X3

    UniProtKB/TrEMBL
    A0A3B1KHX1, W5K1L3
    Related
    ENSAMXP00025047690.1, ENSAMXT00025060557.1
    Conserved Domains (2) summary
    cd14072
    Location:57 → 309
    STKc_MARK; Catalytic domain of the Serine/Threonine Kinases, MAP/microtubule affinity-regulating kinases
    cl21463
    Location:327 → 369
    UBA_like_SF; UBA domain-like superfamily

  3. XM_049466579.1 → XP_049322536.1  MAP/microtubule affinity-regulating kinase 4 isoform X2

    UniProtKB/TrEMBL
    A0A3B1KHX1
Nucleotide Protein
Heading Accession and Version

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