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KMT5B lysine methyltransferase 5B [ Panthera tigris (tiger) ]

Gene ID: 102963329, updated on 10-Mar-2024

Summary

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Gene symbol
KMT5B
Gene description
lysine methyltransferase 5B
See related
Ensembl:ENSPTIG00000014475
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Also known as
SUV420H1
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: D1
Exon count:
14
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) D1 NC_056669.1 (109723532..109778849, complement)

Chromosome D1 - NC_056669.1Genomic Context describing neighboring genes Neighboring gene T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 Neighboring gene choline kinase alpha Neighboring gene chromosome D1 C11orf24 homolog Neighboring gene LDL receptor related protein 5 Neighboring gene uncharacterized LOC122231014

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056669.1 Chromosome D1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone H4K20 methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone-lysine N-methyltransferase KMT5B
Names
suppressor of variegation 4-20 homolog 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056669.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    109723532..109778849 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042959526.1 → XP_042815460.1  histone-lysine N-methyltransferase KMT5B isoform X2

    Conserved Domains (2) summary
    PHA03325
    Location:496 → 651
    PHA03325; nuclear-egress-membrane-like protein; Provisional
    cd19184
    Location:169 → 312
    SET_KMT5B; SET domain (including post-SET domain) found in histone-lysine N-methyltransferase 5B (KMT5B) and similar proteins

  2. XM_042959523.1 → XP_042815457.1  histone-lysine N-methyltransferase KMT5B isoform X1

    Conserved Domains (2) summary
    PHA03325
    Location:519 → 674
    PHA03325; nuclear-egress-membrane-like protein; Provisional
    cd19184
    Location:192 → 335
    SET_KMT5B; SET domain (including post-SET domain) found in histone-lysine N-methyltransferase 5B (KMT5B) and similar proteins

  3. XM_042959527.1 → XP_042815461.1  histone-lysine N-methyltransferase KMT5B isoform X3

    Conserved Domains (2) summary
    PHA03325
    Location:448 → 603
    PHA03325; nuclear-egress-membrane-like protein; Provisional
    cd19184
    Location:121 → 264
    SET_KMT5B; SET domain (including post-SET domain) found in histone-lysine N-methyltransferase 5B (KMT5B) and similar proteins

  4. XM_042959524.1 → XP_042815458.1  histone-lysine N-methyltransferase KMT5B isoform X1

    Conserved Domains (2) summary
    PHA03325
    Location:519 → 674
    PHA03325; nuclear-egress-membrane-like protein; Provisional
    cd19184
    Location:192 → 335
    SET_KMT5B; SET domain (including post-SET domain) found in histone-lysine N-methyltransferase 5B (KMT5B) and similar proteins

  5. XM_042959528.1 → XP_042815462.1  histone-lysine N-methyltransferase KMT5B isoform X3

    Conserved Domains (2) summary
    PHA03325
    Location:448 → 603
    PHA03325; nuclear-egress-membrane-like protein; Provisional
    cd19184
    Location:121 → 264
    SET_KMT5B; SET domain (including post-SET domain) found in histone-lysine N-methyltransferase 5B (KMT5B) and similar proteins

  6. XM_042959525.1 → XP_042815459.1  histone-lysine N-methyltransferase KMT5B isoform X1

    Conserved Domains (2) summary
    PHA03325
    Location:519 → 674
    PHA03325; nuclear-egress-membrane-like protein; Provisional
    cd19184
    Location:192 → 335
    SET_KMT5B; SET domain (including post-SET domain) found in histone-lysine N-methyltransferase 5B (KMT5B) and similar proteins

  7. XM_042959529.1 → XP_042815463.1  histone-lysine N-methyltransferase KMT5B isoform X4

    Conserved Domains (2) summary
    PHA03325
    Location:279 → 434
    PHA03325; nuclear-egress-membrane-like protein; Provisional
    cl40432
    Location:2 → 92
    SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain superfamily

  8. XM_042959530.1 → XP_042815464.1  histone-lysine N-methyltransferase KMT5B isoform X5

    UniProtKB/TrEMBL
    A0A8C9KGA8
    Conserved Domains (1) summary
    cd19184
    Location:192 → 335
    SET_KMT5B; SET domain (including post-SET domain) found in histone-lysine N-methyltransferase 5B (KMT5B) and similar proteins
Nucleotide Protein
Heading Accession and Version

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