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LOC102710712 probable trehalose-phosphate phosphatase 10 [ Oryza brachyantha (malo sina) ]

Gene ID: 102710712, updated on 7-Dec-2023

Summary

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Gene symbol
LOC102710712
Gene description
probable trehalose-phosphate phosphatase 10
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza brachyantha
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Genomic context

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See LOC102710712 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
11
Annotation release Status Assembly Chr Location
102 current ObraRS2 (GCF_000231095.2) 7 NC_023169.2 (10779391..10784857)
101 previous assembly Oryza_brachyantha.v1.4b (GCF_000231095.1) 7 NC_023169.1 (9687918..9693384)

Chromosome 7 - NC_023169.2Genomic Context describing neighboring genes Neighboring gene spindle and kinetochore-associated protein 1 homolog Neighboring gene adenine phosphoribosyltransferase 3-like Neighboring gene beta-ureidopropionase Neighboring gene asparagine--tRNA ligase, chloroplastic/mitochondrial

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables trehalose-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable trehalose-phosphate phosphatase 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryza brachyantha Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ObraRS2 Primary Assembly

Genomic

  1. NC_023169.2 Reference ObraRS2 Primary Assembly

    Range
    10779391..10784857
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006657640.2 → XP_006657703.1  probable trehalose-phosphate phosphatase 10

    UniProtKB/TrEMBL
    J3MKX2
    Conserved Domains (2) summary
    COG1877
    Location:74 → 349
    OtsB; Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
    cl21460
    Location:37 → 354
    HAD_like; Haloacid Dehalogenase-like Hydrolases
Nucleotide Protein
Heading Accession and Version

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