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LOC102710014 ubiquitin carboxyl-terminal hydrolase 3-like [ Oryza brachyantha (malo sina) ]

Gene ID: 102710014, updated on 7-Dec-2023

Summary

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Gene symbol
LOC102710014
Gene description
ubiquitin carboxyl-terminal hydrolase 3-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza brachyantha
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Genomic context

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Location:
chromosome: 4
Exon count:
9
Annotation release Status Assembly Chr Location
102 current ObraRS2 (GCF_000231095.2) 4 NC_023166.2 (15434243..15437165)
101 previous assembly Oryza_brachyantha.v1.4b (GCF_000231095.1) 4 NC_023166.1 (14939738..14942660)

Chromosome 4 - NC_023166.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121054128 Neighboring gene serine/threonine-protein kinase D6PKL1-like Neighboring gene oleosin 16 kDa Neighboring gene ethylene-responsive transcription factor 2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin carboxyl-terminal hydrolase 3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryza brachyantha Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ObraRS2 Primary Assembly

Genomic

  1. NC_023166.2 Reference ObraRS2 Primary Assembly

    Range
    15434243..15437165
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006652540.2 → XP_006652603.1  ubiquitin carboxyl-terminal hydrolase 3-like

    UniProtKB/TrEMBL
    J3M040
    Conserved Domains (1) summary
    cd09616
    Location:5 → 220
    Peptidase_C12_UCH_L1_L3; Cysteine peptidase C12 containing ubiquitin carboxyl-terminal hydrolase (UCH) families L1 and L3
Nucleotide Protein
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