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dnajc17 DnaJ (Hsp40) homolog, subfamily C, member 17 [ Lepisosteus oculatus (spotted gar) ]

Gene ID: 102689872, updated on 10-Mar-2024

Summary

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Gene symbol
dnajc17
Gene description
DnaJ (Hsp40) homolog, subfamily C, member 17
See related
Ensembl:ENSLOCG00000012721
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepisosteus oculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG7
Exon count:
11
Annotation release Status Assembly LG Location
101 current LepOcu1 (GCF_000242695.1) LG7 NC_023185.1 (16099027..16182587, complement)

Linkage Group LG7 - NC_023185.1Genomic Context describing neighboring genes Neighboring gene regulator of microtubule dynamics 3 Neighboring gene GTP cyclohydrolase I feedback regulator Neighboring gene cdc42 effector protein 2-like Neighboring gene inverted formin 2 Neighboring gene adenylosuccinate synthase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_023185.1 Chromosome LG7 Reference LepOcu1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in spliceosomal complex disassembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dnaJ homolog subfamily C member 17
Names
DnaJ heat shock protein family (Hsp40) member C17

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lepisosteus oculatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepOcu1 Primary Assembly

Genomic

  1. NC_023185.1 Reference LepOcu1 Primary Assembly

    Range
    16099027..16182587 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015350876.1 → XP_015206362.1  dnaJ homolog subfamily C member 17 isoform X2

    Conserved Domains (2) summary
    pfam00226
    Location:11 → 73
    DnaJ; DnaJ domain
    cl17169
    Location:191 → 234
    RRM_SF; RNA recognition motif (RRM) superfamily

  2. XM_006632529.2 → XP_006632592.1  dnaJ homolog subfamily C member 17 isoform X1

    UniProtKB/TrEMBL
    W5N4U8
    Related
    ENSLOCP00000015657.1, ENSLOCT00000015687.1
    Conserved Domains (2) summary
    cd12429
    Location:191 → 254
    RRM_DNAJC17; RNA recognition motif in the DnaJ homolog subfamily C member 17
    pfam00226
    Location:11 → 73
    DnaJ; DnaJ domain
Nucleotide Protein
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Gene LinkOut

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