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LOC102613489 methionine--tRNA ligase, chloroplastic/mitochondrial [ Citrus sinensis (sweet orange) ]

Gene ID: 102613489, updated on 23-Nov-2023

Summary

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Gene symbol
LOC102613489
Gene description
methionine--tRNA ligase, chloroplastic/mitochondrial
Locus tag
KPL70_011004
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus sinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Genomic context

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Location:
chromosome: 4
Exon count:
12
Annotation release Status Assembly Chr Location
103 current DVS_A1.0 (GCF_022201045.2) 4 NC_068559.1 (2762972..2767813, complement)
102 previous assembly Csi_valencia_1.0 (GCF_000317415.1) 7 NC_023052.1 (29314103..29319038)

Chromosome 4 - NC_068559.1Genomic Context describing neighboring genes Neighboring gene dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A Neighboring gene transfer RNA arginine (anticodon CCG) Neighboring gene UDP-glucuronic acid decarboxylase 6-like Neighboring gene hypothetical protein Neighboring gene ACT domain-containing protein ACR9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables methionine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in methionyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast stroma IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
methionine--tRNA ligase, chloroplastic/mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Citrus sinensis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DVS_A1.0 Primary Assembly

Genomic

  1. NC_068559.1 Reference DVS_A1.0 Primary Assembly

    Range
    2762972..2767813 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025101549.2 → XP_024957317.1  methionine--tRNA ligase, chloroplastic/mitochondrial

    Conserved Domains (1) summary
    cl26127
    Location:1 → 581
    PRK12267; methionyl-tRNA synthetase; Reviewed
Nucleotide Protein
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