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LOC102598645 nuclear transcription factor Y subunit B-7 [ Solanum tuberosum (potato) ]

Gene ID: 102598645, updated on 2-Nov-2023

Summary

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Gene symbol
LOC102598645
Gene description
nuclear transcription factor Y subunit B-7
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum tuberosum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Genomic context

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Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
101 current SolTub_3.0 (GCF_000226075.1) Unplaced Scaffold NW_006239114.1 (1110617..1111213)

NW_006239114.1Genomic Context describing neighboring genes Neighboring gene 14.7 kDa ribonuclease H-like protein Neighboring gene uncharacterized LOC107062014

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006239114.1 Unplaced Scaffold Reference SolTub_3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CCAAT-binding factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear transcription factor Y subunit B-7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solanum tuberosum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SolTub_3.0 Primary Assembly

Genomic

  1. NW_006239114.1 Reference SolTub_3.0 Primary Assembly

    Range
    1110617..1111213
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006355034.1 → XP_006355096.1  nuclear transcription factor Y subunit B-7

    UniProtKB/TrEMBL
    M1BE77
    Conserved Domains (1) summary
    pfam00808
    Location:40 → 105
    CBFD_NFYB_HMF; Histone-like transcription factor (CBF/NF-Y) and archaeal histone
Nucleotide Protein
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