U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC102595135 phospholipase D alpha 1 [ Solanum tuberosum (potato) ]

Gene ID: 102595135, updated on 2-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC102595135
Gene description
phospholipase D alpha 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum tuberosum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
101 current SolTub_3.0 (GCF_000226075.1) Unplaced Scaffold NW_006239140.1 (715136..719827)

NW_006239140.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein At2g34160-like Neighboring gene uncharacterized LOC102594798 Neighboring gene uncharacterized LOC102595919 Neighboring gene uncharacterized LOC107062286

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_006239140.1 Unplaced Scaffold Reference SolTub_3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phospholipase D activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylcholine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
phospholipase D alpha 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Solanum tuberosum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SolTub_3.0 Primary Assembly

Genomic

  1. NW_006239140.1 Reference SolTub_3.0 Primary Assembly

    Range
    715136..719827
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006356146.2 → XP_006356208.1  phospholipase D alpha 1

    See identical proteins and their annotated locations for XP_006356208.1

    UniProtKB/TrEMBL
    M1CS26
    Conserved Domains (1) summary
    PLN02270
    Location:1 → 809
    PLN02270; phospholipase D alpha

  2. XM_006356147.2 → XP_006356209.1  phospholipase D alpha 1

    See identical proteins and their annotated locations for XP_006356209.1

    UniProtKB/TrEMBL
    M1CS26
    Conserved Domains (1) summary
    PLN02270
    Location:1 → 809
    PLN02270; phospholipase D alpha

  3. XM_006356145.2 → XP_006356207.1  phospholipase D alpha 1

    See identical proteins and their annotated locations for XP_006356207.1

    UniProtKB/TrEMBL
    M1CS26
    Conserved Domains (1) summary
    PLN02270
    Location:1 → 809
    PLN02270; phospholipase D alpha
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases