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LOC102593069 cell cycle checkpoint control protein RAD9A [ Solanum tuberosum (potato) ]

Gene ID: 102593069, updated on 2-Nov-2023

Summary

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Gene symbol
LOC102593069
Gene description
cell cycle checkpoint control protein RAD9A
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum tuberosum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current SolTub_3.0 (GCF_000226075.1) Unplaced Scaffold NW_006238938.1 (2732469..2740417)

NW_006238938.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102592167 Neighboring gene probable magnesium transporter NIPA4 Neighboring gene uncharacterized LOC107062744 Neighboring gene aspartic proteinase-like protein 2 Neighboring gene uncharacterized LOC102593942

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006238938.1 Unplaced Scaffold Reference SolTub_3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA replication checkpoint signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to ionizing radiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic intra-S DNA damage checkpoint signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of checkpoint clamp complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cell cycle checkpoint control protein RAD9A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solanum tuberosum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SolTub_3.0 Primary Assembly

Genomic

  1. NW_006238938.1 Reference SolTub_3.0 Primary Assembly

    Range
    2732469..2740417
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006339905.2 → XP_006339967.1  cell cycle checkpoint control protein RAD9A

    UniProtKB/TrEMBL
    M1ABY1, M1ABY2
    Conserved Domains (2) summary
    pfam04139
    Location:13 → 282
    Rad9; Rad9
    cl24017
    Location:10 → 273
    PCNA; Proliferating Cell Nuclear Antigen (PCNA) domain found in eukaryotes and archaea. These polymerase processivity factors play a role in DNA replication and repair. PCNA encircles duplex DNA in its central cavity, providing a DNA-bound platform for the ...
Nucleotide Protein
Heading Accession and Version

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