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LOC102586853 beta-galactosidase 17 [ Solanum tuberosum (potato) ]

Gene ID: 102586853, updated on 2-Nov-2023

Summary

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Gene symbol
LOC102586853
Gene description
beta-galactosidase 17
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum tuberosum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Genomic context

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See LOC102586853 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
101 current SolTub_3.0 (GCF_000226075.1) Unplaced Scaffold NW_006239169.1 (245136..257306, complement)

NW_006239169.1Genomic Context describing neighboring genes Neighboring gene protein HOTHEAD Neighboring gene putative pentatricopeptide repeat-containing protein At1g17630 Neighboring gene zinc finger protein NUTCRACKER-like Neighboring gene nucleosome assembly protein 1;4-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006239169.1 Unplaced Scaffold Reference SolTub_3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-galactosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in vacuole IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-galactosidase 17

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solanum tuberosum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SolTub_3.0 Primary Assembly

Genomic

  1. NW_006239169.1 Reference SolTub_3.0 Primary Assembly

    Range
    245136..257306 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006357317.2 → XP_006357379.1  beta-galactosidase 17 isoform X1

    Conserved Domains (2) summary
    pfam01301
    Location:86 → 410
    Glyco_hydro_35; Glycosyl hydrolases family 35
    pfam13364
    Location:614 → 682
    BetaGal_dom4_5; Beta-galactosidase jelly roll domain

  2. XM_015313416.1 → XP_015168902.1  beta-galactosidase 17 isoform X2

    Conserved Domains (1) summary
    pfam01301
    Location:86 → 410
    Glyco_hydro_35; Glycosyl hydrolases family 35

RNA

  1. XR_001474742.1 RNA Sequence

Nucleotide Protein
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