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LOC102584924 delta(12)-acyl-lipid-desaturase-like [ Solanum tuberosum (potato) ]

Gene ID: 102584924, updated on 2-Nov-2023

Summary

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Gene symbol
LOC102584924
Gene description
delta(12)-acyl-lipid-desaturase-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum tuberosum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Genomic context

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See LOC102584924 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current SolTub_3.0 (GCF_000226075.1) Unplaced Scaffold NW_006239005.1 (858075..861335, complement)

NW_006239005.1Genomic Context describing neighboring genes Neighboring gene probable protein phosphatase 2C 60 Neighboring gene heat shock 70 kDa protein-like Neighboring gene geraniol 8-hydroxylase-like Neighboring gene delta(12) oleic acid desaturase FAD2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006239005.1 Unplaced Scaffold Reference SolTub_3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
delta(12) oleic acid desaturase FAD2-like; delta(12)-acyl-lipid-desaturase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solanum tuberosum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SolTub_3.0 Primary Assembly

Genomic

  1. NW_006239005.1 Reference SolTub_3.0 Primary Assembly

    Range
    858075..861335 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015308371.1 → XP_015163857.1  delta(12)-acyl-lipid-desaturase-like isoform X3

    UniProtKB/TrEMBL
    M1CSL3
    Conserved Domains (2) summary
    PLN02505
    Location:1 → 377
    PLN02505; omega-6 fatty acid desaturase
    COG3239
    Location:14 → 375
    DesA; Fatty acid desaturase [Lipid transport and metabolism]

  2. XM_006346552.2 → XP_006346614.2  delta(12) oleic acid desaturase FAD2-like isoform X2

    Conserved Domains (2) summary
    PLN02505
    Location:1 → 383
    PLN02505; omega-6 fatty acid desaturase
    COG3239
    Location:20 → 365
    DesA; Fatty acid desaturase [Lipid transport and metabolism]

  3. XM_015308370.1 → XP_015163856.1  delta(12) oleic acid desaturase FAD2-like isoform X1

    Conserved Domains (2) summary
    PLN02505
    Location:17 → 390
    PLN02505; omega-6 fatty acid desaturase
    COG3239
    Location:36 → 381
    DesA; Fatty acid desaturase [Lipid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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