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LOC102578818 transcription factor TCP4-like [ Solanum tuberosum (potato) ]

Gene ID: 102578818, updated on 2-Nov-2023

Summary

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Gene symbol
LOC102578818
Gene description
transcription factor TCP4-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum tuberosum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Genomic context

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Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
101 current SolTub_3.0 (GCF_000226075.1) Unplaced Scaffold NW_006239207.1 (336534..338614)

NW_006239207.1Genomic Context describing neighboring genes Neighboring gene transcription factor GTE4-like Neighboring gene uncharacterized protein ycf45-like Neighboring gene protein IQ-DOMAIN 1 Neighboring gene uncharacterized LOC102579150

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006239207.1 Unplaced Scaffold Reference SolTub_3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of secondary shoot formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor TCP4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solanum tuberosum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SolTub_3.0 Primary Assembly

Genomic

  1. NW_006239207.1 Reference SolTub_3.0 Primary Assembly

    Range
    336534..338614
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006358891.2 → XP_006358953.1  transcription factor TCP4-like

    UniProtKB/TrEMBL
    M1B8S2
    Conserved Domains (1) summary
    pfam03634
    Location:54 → 151
    TCP; TCP family transcription factor
Nucleotide Protein
Heading Accession and Version

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