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LOC102557999 thyrotropin-releasing hormone receptor [ Alligator mississippiensis (American alligator) ]

Gene ID: 102557999, updated on 23-Oct-2023

Summary

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Gene symbol
LOC102557999
Gene description
thyrotropin-releasing hormone receptor
Locus tag
Y1Q_0016959
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Also known as
TRHR2
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Genomic context

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Location:
chromosome: 10
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 10 NC_081833.1 (75178233..75182550, complement)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017708666.1 (9285..12856, complement)

Chromosome 10 - NC_081833.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109284064 Neighboring gene zinc finger protein, FOG family member 1 Neighboring gene cell death inducing DFFA like effector c Neighboring gene zinc finger CCCH-type containing 18 Neighboring gene interleukin 17C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables thyrotropin-releasing hormone receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phospholipase C-activating G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
thyrotropin-releasing hormone receptor
Names
thyrotropin releasing hormone receptor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081833.1 Reference rAllMis1 Primary Assembly

    Range
    75178233..75182550 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006259803.3 → XP_006259865.2  thyrotropin-releasing hormone receptor

    UniProtKB/TrEMBL
    A0A151P2B9, A0A151P2E2
    Conserved Domains (1) summary
    pfam00001
    Location:56 → 322
    7tm_1; 7 transmembrane receptor (rhodopsin family)
Nucleotide Protein
Heading Accession and Version

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