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WDR43 WD repeat domain 43 [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102463711, updated on 10-Mar-2024

Summary

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Gene symbol
WDR43
Gene description
WD repeat domain 43
See related
Ensembl:ENSPSIG00000014217
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005853125.1 (916417..952594, complement)

NW_005853125.1Genomic Context describing neighboring genes Neighboring gene CAP-Gly domain containing linker protein family member 4 Neighboring gene uncharacterized LOC112544568 Neighboring gene photoreceptor cilium actin regulator Neighboring gene TOG array regulator of axonemal microtubules 2 Neighboring gene small nucleolar RNA SNORD53/SNORD92 Neighboring gene small nucleolar RNA SNORD53/SNORD92 Neighboring gene small nucleolar RNA SNORD53/SNORD92 Neighboring gene small nucleolar RNA SNORD53/SNORD92 Neighboring gene tRNA methyltransferase 61B Neighboring gene speedy/RINGO cell cycle regulator family member A Neighboring gene protein phosphatase 1 catalytic subunit beta

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005853125 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WD repeat-containing protein 43

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005853125.1 Reference PelSin_1.0 Primary Assembly

    Range
    916417..952594 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014569791.1 → XP_014425277.1  WD repeat-containing protein 43

    UniProtKB/TrEMBL
    K7G6M0
    Related
    ENSPSIP00000015931.1, ENSPSIT00000016006.1
    Conserved Domains (5) summary
    COG2319
    Location:23 → 227
    WD40; WD40 repeat [General function prediction only]
    pfam04003
    Location:402 → 498
    Utp12; Dip2/Utp12 Family
    sd00039
    Location:56 → 92
    7WD40; WD40 repeat [structural motif]
    cl00909
    Location:542 → 603
    Ribosomal_L24e_L24; Ribosomal protein L24e/L24 is a ribosomal protein found in eukaryotes (L24) and in archaea (L24e, distinct from archaeal L24). L24e/L24 is located on the surface of the large subunit, adjacent to proteins L14 and L3, and near the translation factor ...
    cl02567
    Location:22 → 239
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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