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CALY calcyon neuron specific vesicular protein [ Bubalus bubalis (water buffalo) ]

Gene ID: 102391827, updated on 10-Mar-2024

Summary

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Gene symbol
CALY
Gene description
calcyon neuron specific vesicular protein
See related
EnsemblRapid:ENSBALG00030007924
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See CALY in Genome Data Viewer
Location:
chromosome: 23
Exon count:
6
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 23 NC_059179.1 (51750947..51762222, complement)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 23 NC_058365.1 (51092547..51103816, complement)

Chromosome 23 - NC_059179.1Genomic Context describing neighboring genes Neighboring gene homeobox protein MSX-3-like Neighboring gene uncharacterized LOC123331303 Neighboring gene uncharacterized LOC102393233 Neighboring gene proline rich acidic protein 1 Neighboring gene fucose mutarotase Neighboring gene enoyl-CoA hydratase, short chain 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables clathrin light chain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in clathrin coat assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dopamine receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosomal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neuron-specific vesicular protein calcyon

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059179.1 Reference NDDB_SH_1 Primary Assembly

    Range
    51750947..51762222 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006070983.4 → XP_006071045.1  neuron-specific vesicular protein calcyon

    See identical proteins and their annotated locations for XP_006071045.1

    Related
    ENSBALP00030014549.1, ENSBALT00030022003.1
    Conserved Domains (1) summary
    pfam06387
    Location:1 → 170
    Calcyon; D1 dopamine receptor-interacting protein (calcyon)
Nucleotide Protein
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