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LOC102356101 ras-related protein Rab-39A [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102356101, updated on 2-May-2024

Summary

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Gene symbol
LOC102356101
Gene description
ras-related protein Rab-39A
See related
Ensembl:ENSLACG00000002332
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
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Genomic context

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Location:
chromosome: 4
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 4 NC_088142.1 (202634475..202673698, complement)
101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005822955.1 (45720..84586, complement)

Chromosome 4 - NC_088142.1Genomic Context describing neighboring genes Neighboring gene nuclear protein, ataxia-telangiectasia locus Neighboring gene acetyl-CoA acetyltransferase 1 Neighboring gene cullin-5 Neighboring gene uncharacterized LOC102356385 Neighboring gene solute carrier family 35 member F2 Neighboring gene uncharacterized LOC135356396

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Rab protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phagosome-lysosome fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-related protein Rab-39A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLatCha1.pri

Genomic

  1. NC_088142.1 Reference fLatCha1.pri

    Range
    202634475..202673698 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006013203.2 → XP_006013265.1  ras-related protein Rab-39A

    UniProtKB/TrEMBL
    H2ZYY5
    Related
    ENSLACP00000002606.1, ENSLACT00000002627.1
    Conserved Domains (2) summary
    cd04111
    Location:7 → 213
    Rab39; Rab GTPase family 39 (Rab39)
    smart00175
    Location:9 → 172
    RAB; Rab subfamily of small GTPases
Nucleotide Protein
Heading Accession and Version

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