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SCIMP SLP adaptor and CSK interacting membrane protein [ Capra hircus (goat) ]

Gene ID: 102172657, updated on 10-Mar-2024

Summary

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Gene symbol
SCIMP
Gene description
SLP adaptor and CSK interacting membrane protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Orthologs
human mouse all
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Genomic context

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See SCIMP in Genome Data Viewer
Location:
chromosome: 19
Exon count:
6
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) 19 NC_030826.1 (26087736..26108683)
101 previous assembly CHIR_1.0 (GCF_000317765.1) 19 NC_022311.1 (25576232..25597147)

Chromosome 19 - NC_030826.1Genomic Context describing neighboring genes Neighboring gene nucleoporin 88 Neighboring gene rabaptin, RAB GTPase binding effector protein 1 Neighboring gene zinc finger protein 594 Neighboring gene zinc finger protein 232

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in immunological synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in tetraspanin-enriched microdomain IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SLP adapter and CSK-interacting membrane protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NC_030826.1 Reference ASM170441v1 Primary Assembly

    Range
    26087736..26108683
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013972056.2 → XP_013827510.1  SLP adapter and CSK-interacting membrane protein isoform X1

    UniProtKB/TrEMBL
    A0A8C2SAE2
    Conserved Domains (1) summary
    pfam15050
    Location:19 → 151
    SCIMP; SCIMP protein

  2. XM_005693445.3 → XP_005693502.1  SLP adapter and CSK-interacting membrane protein isoform X1

    UniProtKB/TrEMBL
    A0A8C2SAE2
    Conserved Domains (1) summary
    pfam15050
    Location:19 → 151
    SCIMP; SCIMP protein

  3. XM_005693446.3 → XP_005693503.1  SLP adapter and CSK-interacting membrane protein isoform X2

    UniProtKB/TrEMBL
    A0A8C2SAE2
    Conserved Domains (1) summary
    pfam15050
    Location:1 → 133
    SCIMP; SCIMP protein
Nucleotide Protein
Heading Accession and Version

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