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FIP1L1 factor interacting with PAPOLA and CPSF1 [ Columba livia (rock pigeon) ]

Gene ID: 102088119, updated on 10-May-2024

Summary

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Gene symbol
FIP1L1
Gene description
factor interacting with PAPOLA and CPSF1
Locus tag
A306_08939
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Columba
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_05 current bColLiv1.pat.W.v2 (GCF_036013475.1) 4 NC_088605.1 (28657635..28700598)
102 previous assembly Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973253.1 (3624904..3668196, complement)

Chromosome 4 - NC_088605.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110357871 Neighboring gene RAS like family 11 member B Neighboring gene sec1 family domain containing 2 Neighboring gene ligand of numb-protein X 1 Neighboring gene uncharacterized LOC135579347 Neighboring gene cysteine rich hydrophobic domain 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mRNA cleavage and polyadenylation specificity factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pre-mRNA 3'-end-processing factor FIP1
Names
Pre-mRNA 3'-end-processing factor FIP1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036013475.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColLiv1.pat.W.v2

Genomic

  1. NC_088605.1 Reference bColLiv1.pat.W.v2

    Range
    28657635..28700598
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065060909.1 → XP_064916981.1  pre-mRNA 3'-end-processing factor FIP1 isoform X1

  2. XM_065060911.1 → XP_064916983.1  pre-mRNA 3'-end-processing factor FIP1 isoform X3

  3. XM_065060915.1 → XP_064916987.1  pre-mRNA 3'-end-processing factor FIP1 isoform X7

  4. XM_065060916.1 → XP_064916988.1  pre-mRNA 3'-end-processing factor FIP1 isoform X8

  5. XM_065060912.1 → XP_064916984.1  pre-mRNA 3'-end-processing factor FIP1 isoform X4

  6. XM_065060914.1 → XP_064916986.1  pre-mRNA 3'-end-processing factor FIP1 isoform X6

  7. XM_065060917.1 → XP_064916989.1  pre-mRNA 3'-end-processing factor FIP1 isoform X9

  8. XM_065060919.1 → XP_064916991.1  pre-mRNA 3'-end-processing factor FIP1 isoform X10

  9. XM_065060910.1 → XP_064916982.1  pre-mRNA 3'-end-processing factor FIP1 isoform X2

  10. XM_065060913.1 → XP_064916985.1  pre-mRNA 3'-end-processing factor FIP1 isoform X5

  11. XM_065060920.1 → XP_064916992.1  pre-mRNA 3'-end-processing factor FIP1 isoform X11

Nucleotide Protein
Heading Accession and Version

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