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Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 [ Chinchilla lanigera (long-tailed chinchilla) ]

Gene ID: 102018322, updated on 10-Mar-2024

Summary

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Gene symbol
Hmgcs2
Gene description
3-hydroxy-3-methylglutaryl-CoA synthase 2
See related
Ensembl:ENSCLAG00000006432
Gene type
protein coding
RefSeq status
MODEL
Organism
Chinchilla lanigera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Chinchillidae; Chinchilla
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current ChiLan1.0 (GCF_000276665.1) Unplaced Scaffold NW_004955435.1 (22804484..22820807, complement)

NW_004955435.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 697 Neighboring gene phosphoglycerate dehydrogenase Neighboring gene putative protein FAM10A5 Neighboring gene regenerating family member 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004955435.1 Unplaced Scaffold Reference ChiLan1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydroxymethylglutaryl-CoA synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acetyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in farnesyl diphosphate biosynthetic process, mevalonate pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hydroxymethylglutaryl-CoA synthase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chinchilla lanigera Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChiLan1.0 Primary Assembly

Genomic

  1. NW_004955435.1 Reference ChiLan1.0 Primary Assembly

    Range
    22804484..22820807 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005389089.2 → XP_005389146.2  hydroxymethylglutaryl-CoA synthase, mitochondrial

    UniProtKB/TrEMBL
    A0A8C2YMC8
    Related
    ENSCLAP00000009240.1, ENSCLAT00000009369.1
    Conserved Domains (3) summary
    TIGR01833
    Location:50 → 506
    HMG-CoA-S_euk; 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade
    pfam01154
    Location:53 → 223
    HMG_CoA_synt_N; Hydroxymethylglutaryl-coenzyme A synthase N terminal
    pfam08540
    Location:224 → 506
    HMG_CoA_synt_C; Hydroxymethylglutaryl-coenzyme A synthase C terminal
Nucleotide Protein
Heading Accession and Version

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