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Ercc6l2 ERCC excision repair 6 like 2 [ Microtus ochrogaster (prairie vole) ]

Gene ID: 102000145, updated on 10-Mar-2024

Summary

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Gene symbol
Ercc6l2
Gene description
ERCC excision repair 6 like 2
See related
Ensembl:ENSMOCG00000019362
Gene type
protein coding
RefSeq status
MODEL
Organism
Microtus ochrogaster
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Microtus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
102 current MicOch1.0 (GCF_000317375.1) Unplaced Scaffold NW_004949216.1 (49550..138012)

NW_004949216.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106144456 Neighboring gene hydroxysteroid 17-beta dehydrogenase 3 Neighboring gene solute carrier family 35 member D2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004949216 Unplaced Scaffold Reference MicOch1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent chromatin remodeler activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA excision repair protein ERCC-6-like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microtus ochrogaster Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MicOch1.0

Genomic

  1. NW_004949216.1 Reference MicOch1.0

    Range
    49550..138012
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005371635.3 → XP_005371692.1  DNA excision repair protein ERCC-6-like 2 isoform X1

    Related
    ENSMOCP00000022280.1, ENSMOCT00000026122.1
    Conserved Domains (4) summary
    cd04508
    Location:20 → 70
    TUDOR; Tudor domains are found in many eukaryotic organisms and have been implicated in protein-protein interactions in which methylated protein substrates bind to these domains. For example, the Tudor domain of Survival of Motor Neuron (SMN) binds to ...
    cd00046
    Location:141 → 301
    DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
    pfam00176
    Location:125 → 430
    SNF2_N; SNF2 family N-terminal domain
    pfam00271
    Location:505 → 619
    Helicase_C; Helicase conserved C-terminal domain

  2. XM_026778266.1 → XP_026634067.1  DNA excision repair protein ERCC-6-like 2 isoform X2

  3. XM_026778267.1 → XP_026634068.1  DNA excision repair protein ERCC-6-like 2 isoform X3

    Conserved Domains (1) summary
    COG0553
    Location:1 → 453
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]

RNA

  1. XR_003376752.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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