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Nfkbib NFKB inhibitor beta [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101978426, updated on 8-Mar-2024

Summary

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Gene symbol
Nfkbib
Gene description
NFKB inhibitor beta
Locus tag
H1C71_039055
See related
EnsemblRapid:ENSSTOG00015018607
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024409349.1 (13422102..13429688)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936661.1 (1850185..1857757)

NW_024409349.1Genomic Context describing neighboring genes Neighboring gene Ras and Rab interactor like Neighboring gene sirtuin 2 Neighboring gene coiled-coil glutamate rich protein 2 Neighboring gene seryl-tRNA synthetase 2, mitochondrial Neighboring gene transfer RNA alanine (anticodon CGC)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to lipopolysaccharide IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cytoplasmic sequestering of NF-kappaB IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NF-kappa-B inhibitor beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NW_024409349.1 Reference HiC_Itri_2 Primary Assembly

    Range
    13422102..13429688
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005336401.3 → XP_005336458.1  NF-kappa-B inhibitor beta

    UniProtKB/TrEMBL
    I3N2K7
    Related
    ENSSTOP00015022951.1, ENSSTOT00015025018.1
    Conserved Domains (3) summary
    PHA03095
    Location:204 → 299
    PHA03095; ankyrin-like protein; Provisional
    COG0666
    Location:57 → 148
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:207 → 238
    ANK; ANK repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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