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Dmrtc2 DMRT like family C2 [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101959474, updated on 8-Mar-2024

Summary

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Gene symbol
Dmrtc2
Gene description
DMRT like family C2
Locus tag
H1C71_039212
See related
EnsemblRapid:ENSSTOG00015015425
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024409349.1 (16235240..16240623, complement)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936706.1 (582541..586735, complement)

NW_024409349.1Genomic Context describing neighboring genes Neighboring gene CD79a molecule Neighboring gene ribosomal protein S19 Neighboring gene LY6/PLAUR domain containing 4 Neighboring gene uncharacterized LOC106145302 Neighboring gene CD177 molecule

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
doublesex- and mab-3-related transcription factor C2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NW_024409349.1 Reference HiC_Itri_2 Primary Assembly

    Range
    16235240..16240623 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040278850.1 → XP_040134784.1  doublesex- and mab-3-related transcription factor C2

    Conserved Domains (3) summary
    smart00301
    Location:38 → 91
    DM; Doublesex DNA-binding motif
    PHA03247
    Location:123 → 358
    PHA03247; large tegument protein UL36; Provisional
    pfam15791
    Location:244 → 371
    DMRT-like; Doublesex-and mab-3-related transcription factor C1 and C2

  2. XM_040278853.1 → XP_040134787.1  doublesex- and mab-3-related transcription factor C2

    Conserved Domains (3) summary
    smart00301
    Location:38 → 91
    DM; Doublesex DNA-binding motif
    PHA03247
    Location:123 → 358
    PHA03247; large tegument protein UL36; Provisional
    pfam15791
    Location:244 → 371
    DMRT-like; Doublesex-and mab-3-related transcription factor C1 and C2

  3. XM_040278851.1 → XP_040134785.1  doublesex- and mab-3-related transcription factor C2

    Conserved Domains (3) summary
    smart00301
    Location:38 → 91
    DM; Doublesex DNA-binding motif
    PHA03247
    Location:123 → 358
    PHA03247; large tegument protein UL36; Provisional
    pfam15791
    Location:244 → 371
    DMRT-like; Doublesex-and mab-3-related transcription factor C1 and C2

  4. XM_040278852.1 → XP_040134786.1  doublesex- and mab-3-related transcription factor C2

    Related
    ENSSTOP00015018870.1, ENSSTOT00015020699.1
    Conserved Domains (3) summary
    smart00301
    Location:38 → 91
    DM; Doublesex DNA-binding motif
    PHA03247
    Location:123 → 358
    PHA03247; large tegument protein UL36; Provisional
    pfam15791
    Location:244 → 371
    DMRT-like; Doublesex-and mab-3-related transcription factor C1 and C2
Nucleotide Protein
Heading Accession and Version

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